Gene : Medtr4g112790 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10285:SF76 - URIDINE KINASE Description:  phosphoribulokinase/uridine kinase-like protein
Genomic Order:  5819 Name:  ? Medtr4g112790
Secondary Identifier:  ? PAC:31113699
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7193 Medicago truncatula pathologic  
Mtruncatula PWY-7196 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g112790 0.5kb upstream 0.5kb upstream 6515 true chr4: 45926228-45932742 Medicago truncatula
Medtr4g112790 0.5kb upstream 0.5kb upstream 500 false chr4: 45926228-45926727 Medicago truncatula
Medtr4g112790 0.5kb downstream 0.5kb downstream 6515 true chr4: 45926728-45933242 Medicago truncatula
Medtr4g112790 0.5kb downstream 0.5kb downstream 500 false chr4: 45932743-45933242 Medicago truncatula
Medtr4g112790 1.0kb upstream 1.0kb upstream 7015 true chr4: 45925728-45932742 Medicago truncatula
Medtr4g112790 1.0kb upstream 1.0kb upstream 1000 false chr4: 45925728-45926727 Medicago truncatula
Medtr4g112790 1.0kb downstream 1.0kb downstream 7015 true chr4: 45926728-45933742 Medicago truncatula
Medtr4g112790 1.0kb downstream 1.0kb downstream 1000 false chr4: 45932743-45933742 Medicago truncatula
Medtr4g112790 2.0kb upstream 2.0kb upstream 8015 true chr4: 45924728-45932742 Medicago truncatula
Medtr4g112790 2.0kb upstream 2.0kb upstream 2000 false chr4: 45924728-45926727 Medicago truncatula
Medtr4g112790 2.0kb downstream 2.0kb downstream 8015 true chr4: 45926728-45934742 Medicago truncatula
Medtr4g112790 2.0kb downstream 2.0kb downstream 2000 false chr4: 45932743-45934742 Medicago truncatula
Medtr4g112790 5.0kb upstream 5.0kb upstream 11015 true chr4: 45921728-45932742 Medicago truncatula
Medtr4g112790 5.0kb upstream 5.0kb upstream 5000 false chr4: 45921728-45926727 Medicago truncatula
Medtr4g112790 5.0kb downstream 5.0kb downstream 11015 true chr4: 45926728-45937742 Medicago truncatula
Medtr4g112790 5.0kb downstream 5.0kb downstream 5000 false chr4: 45932743-45937742 Medicago truncatula
Medtr4g112790 10.0kb upstream 10.0kb upstream 16015 true chr4: 45916728-45932742 Medicago truncatula
Medtr4g112790 10.0kb upstream 10.0kb upstream 10000 false chr4: 45916728-45926727 Medicago truncatula
Medtr4g112790 10.0kb downstream 10.0kb downstream 16015 true chr4: 45926728-45942742 Medicago truncatula
Medtr4g112790 10.0kb downstream 10.0kb downstream 10000 false chr4: 45932743-45942742 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300917 5265 Fabidae View MSA
124070976 5270 Rosid View MSA
123746405 5271 Pentapetalae View MSA
122786866 5272 Eudicot View MSA
122043584 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.664        
cufflinks 1.968        
cufflinks 2.256       High
cufflinks 0.131       Low
cufflinks 2.494       High
cufflinks 0.18       Low
cufflinks 0.32        
cufflinks 1.764        
cufflinks 0.405        

0 Strain