Gene : Medtr4g114970 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24007:SF8 - BRIZ1 Description:  zinc finger (ubiquitin-hydrolase) domain protein
Genomic Order:  6026 Name:  ? Medtr4g114970
Secondary Identifier:  ? PAC:31106709
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g114970 0.5kb upstream 0.5kb upstream 5748 true chr4: 47398200-47403947 Medicago truncatula
Medtr4g114970 0.5kb upstream 0.5kb upstream 500 false chr4: 47398200-47398699 Medicago truncatula
Medtr4g114970 0.5kb downstream 0.5kb downstream 5748 true chr4: 47398700-47404447 Medicago truncatula
Medtr4g114970 0.5kb downstream 0.5kb downstream 500 false chr4: 47403948-47404447 Medicago truncatula
Medtr4g114970 1.0kb upstream 1.0kb upstream 6248 true chr4: 47397700-47403947 Medicago truncatula
Medtr4g114970 1.0kb upstream 1.0kb upstream 1000 false chr4: 47397700-47398699 Medicago truncatula
Medtr4g114970 1.0kb downstream 1.0kb downstream 6248 true chr4: 47398700-47404947 Medicago truncatula
Medtr4g114970 1.0kb downstream 1.0kb downstream 1000 false chr4: 47403948-47404947 Medicago truncatula
Medtr4g114970 2.0kb upstream 2.0kb upstream 7248 true chr4: 47396700-47403947 Medicago truncatula
Medtr4g114970 2.0kb upstream 2.0kb upstream 2000 false chr4: 47396700-47398699 Medicago truncatula
Medtr4g114970 2.0kb downstream 2.0kb downstream 7248 true chr4: 47398700-47405947 Medicago truncatula
Medtr4g114970 2.0kb downstream 2.0kb downstream 2000 false chr4: 47403948-47405947 Medicago truncatula
Medtr4g114970 5.0kb upstream 5.0kb upstream 10248 true chr4: 47393700-47403947 Medicago truncatula
Medtr4g114970 5.0kb upstream 5.0kb upstream 5000 false chr4: 47393700-47398699 Medicago truncatula
Medtr4g114970 5.0kb downstream 5.0kb downstream 10248 true chr4: 47398700-47408947 Medicago truncatula
Medtr4g114970 5.0kb downstream 5.0kb downstream 5000 false chr4: 47403948-47408947 Medicago truncatula
Medtr4g114970 10.0kb upstream 10.0kb upstream 15248 true chr4: 47388700-47403947 Medicago truncatula
Medtr4g114970 10.0kb upstream 10.0kb upstream 10000 false chr4: 47388700-47398699 Medicago truncatula
Medtr4g114970 10.0kb downstream 10.0kb downstream 15248 true chr4: 47398700-47413947 Medicago truncatula
Medtr4g114970 10.0kb downstream 10.0kb downstream 10000 false chr4: 47403948-47413947 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300794 5265 Fabidae View MSA
124062945 5270 Rosid View MSA
123739416 5271 Pentapetalae View MSA
122796180 5272 Eudicot View MSA
122049879 5273 Angiosperm View MSA
121344447 5274 Embryophyte View MSA
123425921 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.413       High
cufflinks 1.149        
cufflinks 1.468        
cufflinks 0.929        
cufflinks 1.038        
cufflinks 0.552       Low
cufflinks 1.837        
cufflinks 1.018        
cufflinks 1.419        

0 Strain