Gene : Medtr4g114950 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10044:SF133 - MND1-INTERACTING PROTEIN 1 Description:  RING/U-box protein
Genomic Order:  6024 Name:  ? Medtr4g114950
Secondary Identifier:  ? PAC:31112056
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g114950 0.5kb upstream 0.5kb upstream 1587 true chr4: 47391181-47392767 Medicago truncatula
Medtr4g114950 0.5kb upstream 0.5kb upstream 500 false chr4: 47392268-47392767 Medicago truncatula
Medtr4g114950 0.5kb downstream 0.5kb downstream 1587 true chr4: 47390681-47392267 Medicago truncatula
Medtr4g114950 0.5kb downstream 0.5kb downstream 500 false chr4: 47390681-47391180 Medicago truncatula
Medtr4g114950 1.0kb upstream 1.0kb upstream 2087 true chr4: 47391181-47393267 Medicago truncatula
Medtr4g114950 1.0kb upstream 1.0kb upstream 1000 false chr4: 47392268-47393267 Medicago truncatula
Medtr4g114950 1.0kb downstream 1.0kb downstream 2087 true chr4: 47390181-47392267 Medicago truncatula
Medtr4g114950 1.0kb downstream 1.0kb downstream 1000 false chr4: 47390181-47391180 Medicago truncatula
Medtr4g114950 2.0kb upstream 2.0kb upstream 3087 true chr4: 47391181-47394267 Medicago truncatula
Medtr4g114950 2.0kb upstream 2.0kb upstream 2000 false chr4: 47392268-47394267 Medicago truncatula
Medtr4g114950 2.0kb downstream 2.0kb downstream 3087 true chr4: 47389181-47392267 Medicago truncatula
Medtr4g114950 2.0kb downstream 2.0kb downstream 2000 false chr4: 47389181-47391180 Medicago truncatula
Medtr4g114950 5.0kb upstream 5.0kb upstream 6087 true chr4: 47391181-47397267 Medicago truncatula
Medtr4g114950 5.0kb upstream 5.0kb upstream 5000 false chr4: 47392268-47397267 Medicago truncatula
Medtr4g114950 5.0kb downstream 5.0kb downstream 6087 true chr4: 47386181-47392267 Medicago truncatula
Medtr4g114950 5.0kb downstream 5.0kb downstream 5000 false chr4: 47386181-47391180 Medicago truncatula
Medtr4g114950 10.0kb upstream 10.0kb upstream 11087 true chr4: 47391181-47402267 Medicago truncatula
Medtr4g114950 10.0kb upstream 10.0kb upstream 10000 false chr4: 47392268-47402267 Medicago truncatula
Medtr4g114950 10.0kb downstream 10.0kb downstream 11087 true chr4: 47381181-47392267 Medicago truncatula
Medtr4g114950 10.0kb downstream 10.0kb downstream 10000 false chr4: 47381181-47391180 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781291 5273 Angiosperm View MSA
122262421 5265 Fabidae Singleton cluster - no MSA
124003661 5270 Rosid Singleton cluster - no MSA
123749248 5271 Pentapetalae View MSA
122773057 5272 Eudicot View MSA
121349684 5274 Embryophyte View MSA
123427372 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain