Gene : Medtr4g114730 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31675:SF6 - AXIAL REGULATOR YABBY 5 Description:  plant-specific transcription factor YABBY family protein
Genomic Order:  6012 Name:  ? Medtr4g114730
Secondary Identifier:  ? PAC:31108268
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g114730 0.5kb upstream 0.5kb upstream 4298 true chr4: 47232867-47237164 Medicago truncatula
Medtr4g114730 0.5kb upstream 0.5kb upstream 500 false chr4: 47236665-47237164 Medicago truncatula
Medtr4g114730 0.5kb downstream 0.5kb downstream 4298 true chr4: 47232367-47236664 Medicago truncatula
Medtr4g114730 0.5kb downstream 0.5kb downstream 500 false chr4: 47232367-47232866 Medicago truncatula
Medtr4g114730 1.0kb upstream 1.0kb upstream 4798 true chr4: 47232867-47237664 Medicago truncatula
Medtr4g114730 1.0kb upstream 1.0kb upstream 1000 false chr4: 47236665-47237664 Medicago truncatula
Medtr4g114730 1.0kb downstream 1.0kb downstream 4798 true chr4: 47231867-47236664 Medicago truncatula
Medtr4g114730 1.0kb downstream 1.0kb downstream 1000 false chr4: 47231867-47232866 Medicago truncatula
Medtr4g114730 2.0kb upstream 2.0kb upstream 5798 true chr4: 47232867-47238664 Medicago truncatula
Medtr4g114730 2.0kb upstream 2.0kb upstream 2000 false chr4: 47236665-47238664 Medicago truncatula
Medtr4g114730 2.0kb downstream 2.0kb downstream 5798 true chr4: 47230867-47236664 Medicago truncatula
Medtr4g114730 2.0kb downstream 2.0kb downstream 2000 false chr4: 47230867-47232866 Medicago truncatula
Medtr4g114730 5.0kb upstream 5.0kb upstream 8798 true chr4: 47232867-47241664 Medicago truncatula
Medtr4g114730 5.0kb upstream 5.0kb upstream 5000 false chr4: 47236665-47241664 Medicago truncatula
Medtr4g114730 5.0kb downstream 5.0kb downstream 8798 true chr4: 47227867-47236664 Medicago truncatula
Medtr4g114730 5.0kb downstream 5.0kb downstream 5000 false chr4: 47227867-47232866 Medicago truncatula
Medtr4g114730 10.0kb upstream 10.0kb upstream 13798 true chr4: 47232867-47246664 Medicago truncatula
Medtr4g114730 10.0kb upstream 10.0kb upstream 10000 false chr4: 47236665-47246664 Medicago truncatula
Medtr4g114730 10.0kb downstream 10.0kb downstream 13798 true chr4: 47222867-47236664 Medicago truncatula
Medtr4g114730 10.0kb downstream 10.0kb downstream 10000 false chr4: 47222867-47232866 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302436 5265 Fabidae View MSA
124061031 5270 Rosid View MSA
123739055 5271 Pentapetalae View MSA
122791721 5272 Eudicot View MSA
122048465 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.57       Low
cufflinks 8.743       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.215        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.269        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain