Gene : Medtr4g115620 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12526//PTHR12526:SF334 - GLYCOSYLTRANSFERASE Description:  sucrose-phosphate synthase family protein
Genomic Order:  6069 Name:  ? Medtr4g115620
Secondary Identifier:  ? PAC:31107460
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7238 Medicago truncatula pathologic  
Mtruncatula SUCSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g115620 0.5kb upstream 0.5kb upstream 7698 true chr4: 47752792-47760489 Medicago truncatula
Medtr4g115620 0.5kb upstream 0.5kb upstream 500 false chr4: 47759990-47760489 Medicago truncatula
Medtr4g115620 0.5kb downstream 0.5kb downstream 7698 true chr4: 47752292-47759989 Medicago truncatula
Medtr4g115620 0.5kb downstream 0.5kb downstream 500 false chr4: 47752292-47752791 Medicago truncatula
Medtr4g115620 1.0kb upstream 1.0kb upstream 8198 true chr4: 47752792-47760989 Medicago truncatula
Medtr4g115620 1.0kb upstream 1.0kb upstream 1000 false chr4: 47759990-47760989 Medicago truncatula
Medtr4g115620 1.0kb downstream 1.0kb downstream 8198 true chr4: 47751792-47759989 Medicago truncatula
Medtr4g115620 1.0kb downstream 1.0kb downstream 1000 false chr4: 47751792-47752791 Medicago truncatula
Medtr4g115620 2.0kb upstream 2.0kb upstream 9198 true chr4: 47752792-47761989 Medicago truncatula
Medtr4g115620 2.0kb upstream 2.0kb upstream 2000 false chr4: 47759990-47761989 Medicago truncatula
Medtr4g115620 2.0kb downstream 2.0kb downstream 9198 true chr4: 47750792-47759989 Medicago truncatula
Medtr4g115620 2.0kb downstream 2.0kb downstream 2000 false chr4: 47750792-47752791 Medicago truncatula
Medtr4g115620 5.0kb upstream 5.0kb upstream 12198 true chr4: 47752792-47764989 Medicago truncatula
Medtr4g115620 5.0kb upstream 5.0kb upstream 5000 false chr4: 47759990-47764989 Medicago truncatula
Medtr4g115620 5.0kb downstream 5.0kb downstream 12198 true chr4: 47747792-47759989 Medicago truncatula
Medtr4g115620 5.0kb downstream 5.0kb downstream 5000 false chr4: 47747792-47752791 Medicago truncatula
Medtr4g115620 10.0kb upstream 10.0kb upstream 17198 true chr4: 47752792-47769989 Medicago truncatula
Medtr4g115620 10.0kb upstream 10.0kb upstream 10000 false chr4: 47759990-47769989 Medicago truncatula
Medtr4g115620 10.0kb downstream 10.0kb downstream 17198 true chr4: 47742792-47759989 Medicago truncatula
Medtr4g115620 10.0kb downstream 10.0kb downstream 10000 false chr4: 47742792-47752791 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306114 5265 Fabidae View MSA
124062800 5270 Rosid View MSA
123741512 5271 Pentapetalae View MSA
122790617 5272 Eudicot View MSA
122047849 5273 Angiosperm View MSA
121310805 5274 Embryophyte View MSA
123348202 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.127     High High
cufflinks 7.65        
cufflinks 7.477        
cufflinks 2.013        
cufflinks 9.889        
cufflinks 0.753       Low
cufflinks 4.232        
cufflinks 6.079        
cufflinks 11.667     High  

0 Strain