Gene : Medtr4g115360 M. truncatula Mt4.0v1
Defline:  (1 of 16) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Description:  Lipid transfer protein
Genomic Order:  6050 Name:  ? Medtr4g115360
Secondary Identifier:  ? PAC:31107798
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g115360 0.5kb upstream 0.5kb upstream 3753 true chr4: 47644558-47648310 Medicago truncatula
Medtr4g115360 0.5kb upstream 0.5kb upstream 500 false chr4: 47647811-47648310 Medicago truncatula
Medtr4g115360 0.5kb downstream 0.5kb downstream 3753 true chr4: 47644058-47647810 Medicago truncatula
Medtr4g115360 0.5kb downstream 0.5kb downstream 500 false chr4: 47644058-47644557 Medicago truncatula
Medtr4g115360 1.0kb upstream 1.0kb upstream 4253 true chr4: 47644558-47648810 Medicago truncatula
Medtr4g115360 1.0kb upstream 1.0kb upstream 1000 false chr4: 47647811-47648810 Medicago truncatula
Medtr4g115360 1.0kb downstream 1.0kb downstream 4253 true chr4: 47643558-47647810 Medicago truncatula
Medtr4g115360 1.0kb downstream 1.0kb downstream 1000 false chr4: 47643558-47644557 Medicago truncatula
Medtr4g115360 2.0kb upstream 2.0kb upstream 5253 true chr4: 47644558-47649810 Medicago truncatula
Medtr4g115360 2.0kb upstream 2.0kb upstream 2000 false chr4: 47647811-47649810 Medicago truncatula
Medtr4g115360 2.0kb downstream 2.0kb downstream 5253 true chr4: 47642558-47647810 Medicago truncatula
Medtr4g115360 2.0kb downstream 2.0kb downstream 2000 false chr4: 47642558-47644557 Medicago truncatula
Medtr4g115360 5.0kb upstream 5.0kb upstream 8253 true chr4: 47644558-47652810 Medicago truncatula
Medtr4g115360 5.0kb upstream 5.0kb upstream 5000 false chr4: 47647811-47652810 Medicago truncatula
Medtr4g115360 5.0kb downstream 5.0kb downstream 8253 true chr4: 47639558-47647810 Medicago truncatula
Medtr4g115360 5.0kb downstream 5.0kb downstream 5000 false chr4: 47639558-47644557 Medicago truncatula
Medtr4g115360 10.0kb upstream 10.0kb upstream 13253 true chr4: 47644558-47657810 Medicago truncatula
Medtr4g115360 10.0kb upstream 10.0kb upstream 10000 false chr4: 47647811-47657810 Medicago truncatula
Medtr4g115360 10.0kb downstream 10.0kb downstream 13253 true chr4: 47634558-47647810 Medicago truncatula
Medtr4g115360 10.0kb downstream 10.0kb downstream 10000 false chr4: 47634558-47644557 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314397 5265 Fabidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.824       Low
cufflinks 114.02     High  
cufflinks 86.485     High  
cufflinks 11.609     High  
cufflinks 167.041     High High
cufflinks 3.102       Low
cufflinks 3.291       Low
cufflinks 82.659     High  
cufflinks 20.064     High  

0 Strain