Gene : Medtr4g115050 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 Description:  structural maintenance-like chromosomes-protein
Genomic Order:  6029 Name:  ? Medtr4g115050
Secondary Identifier:  ? PAC:31108000
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g115050 0.5kb upstream 0.5kb upstream 18945 true chr4: 47429831-47448775 Medicago truncatula
Medtr4g115050 0.5kb upstream 0.5kb upstream 500 false chr4: 47429831-47430330 Medicago truncatula
Medtr4g115050 0.5kb downstream 0.5kb downstream 18945 true chr4: 47430331-47449275 Medicago truncatula
Medtr4g115050 0.5kb downstream 0.5kb downstream 500 false chr4: 47448776-47449275 Medicago truncatula
Medtr4g115050 1.0kb upstream 1.0kb upstream 19445 true chr4: 47429331-47448775 Medicago truncatula
Medtr4g115050 1.0kb upstream 1.0kb upstream 1000 false chr4: 47429331-47430330 Medicago truncatula
Medtr4g115050 1.0kb downstream 1.0kb downstream 19445 true chr4: 47430331-47449775 Medicago truncatula
Medtr4g115050 1.0kb downstream 1.0kb downstream 1000 false chr4: 47448776-47449775 Medicago truncatula
Medtr4g115050 2.0kb upstream 2.0kb upstream 20445 true chr4: 47428331-47448775 Medicago truncatula
Medtr4g115050 2.0kb upstream 2.0kb upstream 2000 false chr4: 47428331-47430330 Medicago truncatula
Medtr4g115050 2.0kb downstream 2.0kb downstream 20445 true chr4: 47430331-47450775 Medicago truncatula
Medtr4g115050 2.0kb downstream 2.0kb downstream 2000 false chr4: 47448776-47450775 Medicago truncatula
Medtr4g115050 5.0kb upstream 5.0kb upstream 23445 true chr4: 47425331-47448775 Medicago truncatula
Medtr4g115050 5.0kb upstream 5.0kb upstream 5000 false chr4: 47425331-47430330 Medicago truncatula
Medtr4g115050 5.0kb downstream 5.0kb downstream 23445 true chr4: 47430331-47453775 Medicago truncatula
Medtr4g115050 5.0kb downstream 5.0kb downstream 5000 false chr4: 47448776-47453775 Medicago truncatula
Medtr4g115050 10.0kb upstream 10.0kb upstream 28445 true chr4: 47420331-47448775 Medicago truncatula
Medtr4g115050 10.0kb upstream 10.0kb upstream 10000 false chr4: 47420331-47430330 Medicago truncatula
Medtr4g115050 10.0kb downstream 10.0kb downstream 28445 true chr4: 47430331-47458775 Medicago truncatula
Medtr4g115050 10.0kb downstream 10.0kb downstream 10000 false chr4: 47448776-47458775 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301924 5265 Fabidae View MSA
124065348 5270 Rosid View MSA
123736538 5271 Pentapetalae View MSA
122789208 5272 Eudicot View MSA
122042538 5273 Angiosperm View MSA
121345004 5274 Embryophyte View MSA
123424617 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.259       High
cufflinks 0.18        
cufflinks 0.218        
cufflinks 0.131       Low
cufflinks 0.293       High
cufflinks 0.224        
cufflinks 0.205        
cufflinks 0.162        
cufflinks 0.202        

0 Strain