Gene : Medtr4g114980 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR22847:SF499 - TOPLESS-RELATED PROTEIN 4 Description:  topless-like protein
Genomic Order:  6027 Name:  ? Medtr4g114980
Secondary Identifier:  ? PAC:31110734
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g114980 0.5kb upstream 0.5kb upstream 10026 true chr4: 47405976-47416001 Medicago truncatula
Medtr4g114980 0.5kb upstream 0.5kb upstream 500 false chr4: 47415502-47416001 Medicago truncatula
Medtr4g114980 0.5kb downstream 0.5kb downstream 10026 true chr4: 47405476-47415501 Medicago truncatula
Medtr4g114980 0.5kb downstream 0.5kb downstream 500 false chr4: 47405476-47405975 Medicago truncatula
Medtr4g114980 1.0kb upstream 1.0kb upstream 10526 true chr4: 47405976-47416501 Medicago truncatula
Medtr4g114980 1.0kb upstream 1.0kb upstream 1000 false chr4: 47415502-47416501 Medicago truncatula
Medtr4g114980 1.0kb downstream 1.0kb downstream 10526 true chr4: 47404976-47415501 Medicago truncatula
Medtr4g114980 1.0kb downstream 1.0kb downstream 1000 false chr4: 47404976-47405975 Medicago truncatula
Medtr4g114980 2.0kb upstream 2.0kb upstream 11526 true chr4: 47405976-47417501 Medicago truncatula
Medtr4g114980 2.0kb upstream 2.0kb upstream 2000 false chr4: 47415502-47417501 Medicago truncatula
Medtr4g114980 2.0kb downstream 2.0kb downstream 11526 true chr4: 47403976-47415501 Medicago truncatula
Medtr4g114980 2.0kb downstream 2.0kb downstream 2000 false chr4: 47403976-47405975 Medicago truncatula
Medtr4g114980 5.0kb upstream 5.0kb upstream 14526 true chr4: 47405976-47420501 Medicago truncatula
Medtr4g114980 5.0kb upstream 5.0kb upstream 5000 false chr4: 47415502-47420501 Medicago truncatula
Medtr4g114980 5.0kb downstream 5.0kb downstream 14526 true chr4: 47400976-47415501 Medicago truncatula
Medtr4g114980 5.0kb downstream 5.0kb downstream 5000 false chr4: 47400976-47405975 Medicago truncatula
Medtr4g114980 10.0kb upstream 10.0kb upstream 19526 true chr4: 47405976-47425501 Medicago truncatula
Medtr4g114980 10.0kb upstream 10.0kb upstream 10000 false chr4: 47415502-47425501 Medicago truncatula
Medtr4g114980 10.0kb downstream 10.0kb downstream 19526 true chr4: 47395976-47415501 Medicago truncatula
Medtr4g114980 10.0kb downstream 10.0kb downstream 10000 false chr4: 47395976-47405975 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304811 5265 Fabidae View MSA
124070265 5270 Rosid View MSA
123752786 5271 Pentapetalae View MSA
122794247 5272 Eudicot View MSA
122049559 5273 Angiosperm View MSA
121350875 5274 Embryophyte View MSA
123381918 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.774        
cufflinks 3.734        
cufflinks 3.374        
cufflinks 1.77       Low
cufflinks 3.943       High
cufflinks 1.361       Low
cufflinks 2.956        
cufflinks 2.502        
cufflinks 3.064        

0 Strain