Gene : Medtr4g104730 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR34806:SF1 - HIGH-AFFINITY NITRATE TRANSPORTER 3.1-RELATED Description:  component of high affinity nitrate transporter
Genomic Order:  5477 Name:  ? Medtr4g104730
Secondary Identifier:  ? PAC:31113268
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g104730 0.5kb upstream 0.5kb upstream 2161 true chr4: 43383529-43385689 Medicago truncatula
Medtr4g104730 0.5kb upstream 0.5kb upstream 500 false chr4: 43385190-43385689 Medicago truncatula
Medtr4g104730 0.5kb downstream 0.5kb downstream 2161 true chr4: 43383029-43385189 Medicago truncatula
Medtr4g104730 0.5kb downstream 0.5kb downstream 500 false chr4: 43383029-43383528 Medicago truncatula
Medtr4g104730 1.0kb upstream 1.0kb upstream 2661 true chr4: 43383529-43386189 Medicago truncatula
Medtr4g104730 1.0kb upstream 1.0kb upstream 1000 false chr4: 43385190-43386189 Medicago truncatula
Medtr4g104730 1.0kb downstream 1.0kb downstream 2661 true chr4: 43382529-43385189 Medicago truncatula
Medtr4g104730 1.0kb downstream 1.0kb downstream 1000 false chr4: 43382529-43383528 Medicago truncatula
Medtr4g104730 2.0kb upstream 2.0kb upstream 3661 true chr4: 43383529-43387189 Medicago truncatula
Medtr4g104730 2.0kb upstream 2.0kb upstream 2000 false chr4: 43385190-43387189 Medicago truncatula
Medtr4g104730 2.0kb downstream 2.0kb downstream 3661 true chr4: 43381529-43385189 Medicago truncatula
Medtr4g104730 2.0kb downstream 2.0kb downstream 2000 false chr4: 43381529-43383528 Medicago truncatula
Medtr4g104730 5.0kb upstream 5.0kb upstream 6661 true chr4: 43383529-43390189 Medicago truncatula
Medtr4g104730 5.0kb upstream 5.0kb upstream 5000 false chr4: 43385190-43390189 Medicago truncatula
Medtr4g104730 5.0kb downstream 5.0kb downstream 6661 true chr4: 43378529-43385189 Medicago truncatula
Medtr4g104730 5.0kb downstream 5.0kb downstream 5000 false chr4: 43378529-43383528 Medicago truncatula
Medtr4g104730 10.0kb upstream 10.0kb upstream 11661 true chr4: 43383529-43395189 Medicago truncatula
Medtr4g104730 10.0kb upstream 10.0kb upstream 10000 false chr4: 43385190-43395189 Medicago truncatula
Medtr4g104730 10.0kb downstream 10.0kb downstream 11661 true chr4: 43373529-43385189 Medicago truncatula
Medtr4g104730 10.0kb downstream 10.0kb downstream 10000 false chr4: 43373529-43383528 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300620 5265 Fabidae View MSA
124066061 5270 Rosid View MSA
123741749 5271 Pentapetalae View MSA
122789119 5272 Eudicot View MSA
122047039 5273 Angiosperm View MSA
121346614 5274 Embryophyte View MSA
123428367 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.1     High  
cufflinks 2.717        
cufflinks 0.986        
cufflinks 25.94     High  
cufflinks 0.321       Low
cufflinks 29.603     High  
cufflinks 11.29     High  
cufflinks 0.864       Low
cufflinks 47.717     High High

0 Strain