Gene : Medtr4g104680 M. truncatula Mt4.0v1
Defline:  (1 of 1) 2.5.1.72 - Quinolinate synthase / Quinolinate synthetase Description:  quinolinate synthetase A protein
Genomic Order:  5474 Name:  ? Medtr4g104680
Secondary Identifier:  ? PAC:31114431
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PYRIDNUCSYN-PWY Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g104680 0.5kb upstream 0.5kb upstream 6516 true chr4: 43366742-43373257 Medicago truncatula
Medtr4g104680 0.5kb upstream 0.5kb upstream 500 false chr4: 43366742-43367241 Medicago truncatula
Medtr4g104680 0.5kb downstream 0.5kb downstream 6516 true chr4: 43367242-43373757 Medicago truncatula
Medtr4g104680 0.5kb downstream 0.5kb downstream 500 false chr4: 43373258-43373757 Medicago truncatula
Medtr4g104680 1.0kb upstream 1.0kb upstream 7016 true chr4: 43366242-43373257 Medicago truncatula
Medtr4g104680 1.0kb upstream 1.0kb upstream 1000 false chr4: 43366242-43367241 Medicago truncatula
Medtr4g104680 1.0kb downstream 1.0kb downstream 7016 true chr4: 43367242-43374257 Medicago truncatula
Medtr4g104680 1.0kb downstream 1.0kb downstream 1000 false chr4: 43373258-43374257 Medicago truncatula
Medtr4g104680 2.0kb upstream 2.0kb upstream 8016 true chr4: 43365242-43373257 Medicago truncatula
Medtr4g104680 2.0kb upstream 2.0kb upstream 2000 false chr4: 43365242-43367241 Medicago truncatula
Medtr4g104680 2.0kb downstream 2.0kb downstream 8016 true chr4: 43367242-43375257 Medicago truncatula
Medtr4g104680 2.0kb downstream 2.0kb downstream 2000 false chr4: 43373258-43375257 Medicago truncatula
Medtr4g104680 5.0kb upstream 5.0kb upstream 11016 true chr4: 43362242-43373257 Medicago truncatula
Medtr4g104680 5.0kb upstream 5.0kb upstream 5000 false chr4: 43362242-43367241 Medicago truncatula
Medtr4g104680 5.0kb downstream 5.0kb downstream 11016 true chr4: 43367242-43378257 Medicago truncatula
Medtr4g104680 5.0kb downstream 5.0kb downstream 5000 false chr4: 43373258-43378257 Medicago truncatula
Medtr4g104680 10.0kb upstream 10.0kb upstream 16016 true chr4: 43357242-43373257 Medicago truncatula
Medtr4g104680 10.0kb upstream 10.0kb upstream 10000 false chr4: 43357242-43367241 Medicago truncatula
Medtr4g104680 10.0kb downstream 10.0kb downstream 16016 true chr4: 43367242-43383257 Medicago truncatula
Medtr4g104680 10.0kb downstream 10.0kb downstream 10000 false chr4: 43373258-43383257 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305175 5265 Fabidae View MSA
124063584 5270 Rosid View MSA
123753415 5271 Pentapetalae View MSA
122792816 5272 Eudicot View MSA
122044938 5273 Angiosperm View MSA
121346502 5274 Embryophyte View MSA
123424432 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.179       Low
cufflinks 11.974     High  
cufflinks 11.989     High  
cufflinks 0.643        
cufflinks 11.085     High  
cufflinks 0.081     Low Low
cufflinks 0.882        
cufflinks 11.17     High  
cufflinks 2.228        

0 Strain