Gene : Medtr4g104620 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR24058//PTHR24058:SF58 - DUAL SPECIFICITY PROTEIN KINASE Description:  kinase AFC1
Genomic Order:  5471 Name:  ? Medtr4g104620
Secondary Identifier:  ? PAC:31114712
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g104620 0.5kb upstream 0.5kb upstream 4623 true chr4: 43318973-43323595 Medicago truncatula
Medtr4g104620 0.5kb upstream 0.5kb upstream 500 false chr4: 43318973-43319472 Medicago truncatula
Medtr4g104620 0.5kb downstream 0.5kb downstream 4623 true chr4: 43319473-43324095 Medicago truncatula
Medtr4g104620 0.5kb downstream 0.5kb downstream 500 false chr4: 43323596-43324095 Medicago truncatula
Medtr4g104620 1.0kb upstream 1.0kb upstream 5123 true chr4: 43318473-43323595 Medicago truncatula
Medtr4g104620 1.0kb upstream 1.0kb upstream 1000 false chr4: 43318473-43319472 Medicago truncatula
Medtr4g104620 1.0kb downstream 1.0kb downstream 5123 true chr4: 43319473-43324595 Medicago truncatula
Medtr4g104620 1.0kb downstream 1.0kb downstream 1000 false chr4: 43323596-43324595 Medicago truncatula
Medtr4g104620 2.0kb upstream 2.0kb upstream 6123 true chr4: 43317473-43323595 Medicago truncatula
Medtr4g104620 2.0kb upstream 2.0kb upstream 2000 false chr4: 43317473-43319472 Medicago truncatula
Medtr4g104620 2.0kb downstream 2.0kb downstream 6123 true chr4: 43319473-43325595 Medicago truncatula
Medtr4g104620 2.0kb downstream 2.0kb downstream 2000 false chr4: 43323596-43325595 Medicago truncatula
Medtr4g104620 5.0kb upstream 5.0kb upstream 9123 true chr4: 43314473-43323595 Medicago truncatula
Medtr4g104620 5.0kb upstream 5.0kb upstream 5000 false chr4: 43314473-43319472 Medicago truncatula
Medtr4g104620 5.0kb downstream 5.0kb downstream 9123 true chr4: 43319473-43328595 Medicago truncatula
Medtr4g104620 5.0kb downstream 5.0kb downstream 5000 false chr4: 43323596-43328595 Medicago truncatula
Medtr4g104620 10.0kb upstream 10.0kb upstream 14123 true chr4: 43309473-43323595 Medicago truncatula
Medtr4g104620 10.0kb upstream 10.0kb upstream 10000 false chr4: 43309473-43319472 Medicago truncatula
Medtr4g104620 10.0kb downstream 10.0kb downstream 14123 true chr4: 43319473-43333595 Medicago truncatula
Medtr4g104620 10.0kb downstream 10.0kb downstream 10000 false chr4: 43323596-43333595 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301872 5265 Fabidae View MSA
124066575 5270 Rosid View MSA
123751115 5271 Pentapetalae View MSA
122792813 5272 Eudicot View MSA
122041750 5273 Angiosperm View MSA
121349585 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.315        
cufflinks 9.827     High  
cufflinks 11.178     High High
cufflinks 2.856       Low
cufflinks 9.324        
cufflinks 3.017       Low
cufflinks 4.471        
cufflinks 10.888     High High
cufflinks 4.551        

0 Strain