Gene : Medtr4g088980 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG4031 - Vesicle coat protein clathrin, light chain Description:  clathrin light chain-like protein
Genomic Order:  4489 Name:  ? Medtr4g088980
Secondary Identifier:  ? PAC:31109015
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g088980 0.5kb upstream 0.5kb upstream 3809 true chr4: 35589688-35593496 Medicago truncatula
Medtr4g088980 0.5kb upstream 0.5kb upstream 500 false chr4: 35592997-35593496 Medicago truncatula
Medtr4g088980 0.5kb downstream 0.5kb downstream 3809 true chr4: 35589188-35592996 Medicago truncatula
Medtr4g088980 0.5kb downstream 0.5kb downstream 500 false chr4: 35589188-35589687 Medicago truncatula
Medtr4g088980 1.0kb upstream 1.0kb upstream 4309 true chr4: 35589688-35593996 Medicago truncatula
Medtr4g088980 1.0kb upstream 1.0kb upstream 1000 false chr4: 35592997-35593996 Medicago truncatula
Medtr4g088980 1.0kb downstream 1.0kb downstream 4309 true chr4: 35588688-35592996 Medicago truncatula
Medtr4g088980 1.0kb downstream 1.0kb downstream 1000 false chr4: 35588688-35589687 Medicago truncatula
Medtr4g088980 2.0kb upstream 2.0kb upstream 5309 true chr4: 35589688-35594996 Medicago truncatula
Medtr4g088980 2.0kb upstream 2.0kb upstream 2000 false chr4: 35592997-35594996 Medicago truncatula
Medtr4g088980 2.0kb downstream 2.0kb downstream 5309 true chr4: 35587688-35592996 Medicago truncatula
Medtr4g088980 2.0kb downstream 2.0kb downstream 2000 false chr4: 35587688-35589687 Medicago truncatula
Medtr4g088980 5.0kb upstream 5.0kb upstream 8309 true chr4: 35589688-35597996 Medicago truncatula
Medtr4g088980 5.0kb upstream 5.0kb upstream 5000 false chr4: 35592997-35597996 Medicago truncatula
Medtr4g088980 5.0kb downstream 5.0kb downstream 8309 true chr4: 35584688-35592996 Medicago truncatula
Medtr4g088980 5.0kb downstream 5.0kb downstream 5000 false chr4: 35584688-35589687 Medicago truncatula
Medtr4g088980 10.0kb upstream 10.0kb upstream 13309 true chr4: 35589688-35602996 Medicago truncatula
Medtr4g088980 10.0kb upstream 10.0kb upstream 10000 false chr4: 35592997-35602996 Medicago truncatula
Medtr4g088980 10.0kb downstream 10.0kb downstream 13309 true chr4: 35579688-35592996 Medicago truncatula
Medtr4g088980 10.0kb downstream 10.0kb downstream 10000 false chr4: 35579688-35589687 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296653 5265 Fabidae View MSA
124061601 5270 Rosid View MSA
123752626 5271 Pentapetalae View MSA
122796141 5272 Eudicot View MSA
122042029 5273 Angiosperm View MSA
121347289 5274 Embryophyte View MSA
123426291 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.139       Low
cufflinks 15.7     High  
cufflinks 11.367     High  
cufflinks 19.583     High  
cufflinks 15.88     High  
cufflinks 12.117     High  
cufflinks 16.859     High  
cufflinks 10.224     High  
cufflinks 30.879     High High

0 Strain