Gene : Medtr4g105500 M. truncatula Mt4.0v1
Description:  embryo defective 2759 protein, putative Genomic Order:  5526
Name:  ? Medtr4g105500 Secondary Identifier:  ? PAC:31111939
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g105500 0.5kb upstream 0.5kb upstream 3606 true chr4: 43782597-43786202 Medicago truncatula
Medtr4g105500 0.5kb upstream 0.5kb upstream 500 false chr4: 43782597-43783096 Medicago truncatula
Medtr4g105500 0.5kb downstream 0.5kb downstream 3606 true chr4: 43783097-43786702 Medicago truncatula
Medtr4g105500 0.5kb downstream 0.5kb downstream 500 false chr4: 43786203-43786702 Medicago truncatula
Medtr4g105500 1.0kb upstream 1.0kb upstream 4106 true chr4: 43782097-43786202 Medicago truncatula
Medtr4g105500 1.0kb upstream 1.0kb upstream 1000 false chr4: 43782097-43783096 Medicago truncatula
Medtr4g105500 1.0kb downstream 1.0kb downstream 4106 true chr4: 43783097-43787202 Medicago truncatula
Medtr4g105500 1.0kb downstream 1.0kb downstream 1000 false chr4: 43786203-43787202 Medicago truncatula
Medtr4g105500 2.0kb upstream 2.0kb upstream 5106 true chr4: 43781097-43786202 Medicago truncatula
Medtr4g105500 2.0kb upstream 2.0kb upstream 2000 false chr4: 43781097-43783096 Medicago truncatula
Medtr4g105500 2.0kb downstream 2.0kb downstream 5106 true chr4: 43783097-43788202 Medicago truncatula
Medtr4g105500 2.0kb downstream 2.0kb downstream 2000 false chr4: 43786203-43788202 Medicago truncatula
Medtr4g105500 5.0kb upstream 5.0kb upstream 8106 true chr4: 43778097-43786202 Medicago truncatula
Medtr4g105500 5.0kb upstream 5.0kb upstream 5000 false chr4: 43778097-43783096 Medicago truncatula
Medtr4g105500 5.0kb downstream 5.0kb downstream 8106 true chr4: 43783097-43791202 Medicago truncatula
Medtr4g105500 5.0kb downstream 5.0kb downstream 5000 false chr4: 43786203-43791202 Medicago truncatula
Medtr4g105500 10.0kb upstream 10.0kb upstream 13106 true chr4: 43773097-43786202 Medicago truncatula
Medtr4g105500 10.0kb upstream 10.0kb upstream 10000 false chr4: 43773097-43783096 Medicago truncatula
Medtr4g105500 10.0kb downstream 10.0kb downstream 13106 true chr4: 43783097-43796202 Medicago truncatula
Medtr4g105500 10.0kb downstream 10.0kb downstream 10000 false chr4: 43786203-43796202 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791743 5273 Angiosperm View MSA
122311548 5265 Fabidae View MSA
124062295 5270 Rosid View MSA
123738445 5271 Pentapetalae View MSA
122788758 5272 Eudicot View MSA
121349367 5274 Embryophyte View MSA
123381288 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.171        
cufflinks 2.812        
cufflinks 3.369        
cufflinks 1.025       Low
cufflinks 4.187       High
cufflinks 0.795       Low
cufflinks 1.647        
cufflinks 3.068        
cufflinks 1.095        

0 Strain