Gene : Medtr4g105220 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11751//PTHR11751:SF434 - SUBGROUP I AMINOTRANSFERASE RELATED Description:  tryptophan aminotransferase-like protein
Genomic Order:  5511 Name:  ? Medtr4g105220
Secondary Identifier:  ? PAC:31114638
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWYDQC-4 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g105220 0.5kb upstream 0.5kb upstream 9385 true chr4: 43611194-43620578 Medicago truncatula
Medtr4g105220 0.5kb upstream 0.5kb upstream 500 false chr4: 43620079-43620578 Medicago truncatula
Medtr4g105220 0.5kb downstream 0.5kb downstream 9385 true chr4: 43610694-43620078 Medicago truncatula
Medtr4g105220 0.5kb downstream 0.5kb downstream 500 false chr4: 43610694-43611193 Medicago truncatula
Medtr4g105220 1.0kb upstream 1.0kb upstream 9885 true chr4: 43611194-43621078 Medicago truncatula
Medtr4g105220 1.0kb upstream 1.0kb upstream 1000 false chr4: 43620079-43621078 Medicago truncatula
Medtr4g105220 1.0kb downstream 1.0kb downstream 9885 true chr4: 43610194-43620078 Medicago truncatula
Medtr4g105220 1.0kb downstream 1.0kb downstream 1000 false chr4: 43610194-43611193 Medicago truncatula
Medtr4g105220 2.0kb upstream 2.0kb upstream 10885 true chr4: 43611194-43622078 Medicago truncatula
Medtr4g105220 2.0kb upstream 2.0kb upstream 2000 false chr4: 43620079-43622078 Medicago truncatula
Medtr4g105220 2.0kb downstream 2.0kb downstream 10885 true chr4: 43609194-43620078 Medicago truncatula
Medtr4g105220 2.0kb downstream 2.0kb downstream 2000 false chr4: 43609194-43611193 Medicago truncatula
Medtr4g105220 5.0kb upstream 5.0kb upstream 13885 true chr4: 43611194-43625078 Medicago truncatula
Medtr4g105220 5.0kb upstream 5.0kb upstream 5000 false chr4: 43620079-43625078 Medicago truncatula
Medtr4g105220 5.0kb downstream 5.0kb downstream 13885 true chr4: 43606194-43620078 Medicago truncatula
Medtr4g105220 5.0kb downstream 5.0kb downstream 5000 false chr4: 43606194-43611193 Medicago truncatula
Medtr4g105220 10.0kb upstream 10.0kb upstream 18885 true chr4: 43611194-43630078 Medicago truncatula
Medtr4g105220 10.0kb upstream 10.0kb upstream 10000 false chr4: 43620079-43630078 Medicago truncatula
Medtr4g105220 10.0kb downstream 10.0kb downstream 18885 true chr4: 43601194-43620078 Medicago truncatula
Medtr4g105220 10.0kb downstream 10.0kb downstream 10000 false chr4: 43601194-43611193 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311428 5265 Fabidae View MSA
124065149 5270 Rosid View MSA
123746345 5271 Pentapetalae View MSA
122790946 5272 Eudicot View MSA
122048062 5273 Angiosperm View MSA
121350160 5274 Embryophyte View MSA
123381598 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low  
cufflinks 1.47        
cufflinks 2.478       High
cufflinks 0.026     Low  
cufflinks 2.207       High
cufflinks 0.007     Low Low
cufflinks 0.134        
cufflinks 1.668        
cufflinks 0.097        

0 Strain