Gene : Medtr4g106680 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Description:  RING-H2 finger protein ATL47
Genomic Order:  5564 Name:  ? Medtr4g106680
Secondary Identifier:  ? PAC:31107135
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g106680 0.5kb upstream 0.5kb upstream 1792 true chr4: 44026190-44027981 Medicago truncatula
Medtr4g106680 0.5kb upstream 0.5kb upstream 500 false chr4: 44027482-44027981 Medicago truncatula
Medtr4g106680 0.5kb downstream 0.5kb downstream 1792 true chr4: 44025690-44027481 Medicago truncatula
Medtr4g106680 0.5kb downstream 0.5kb downstream 500 false chr4: 44025690-44026189 Medicago truncatula
Medtr4g106680 1.0kb upstream 1.0kb upstream 2292 true chr4: 44026190-44028481 Medicago truncatula
Medtr4g106680 1.0kb upstream 1.0kb upstream 1000 false chr4: 44027482-44028481 Medicago truncatula
Medtr4g106680 1.0kb downstream 1.0kb downstream 2292 true chr4: 44025190-44027481 Medicago truncatula
Medtr4g106680 1.0kb downstream 1.0kb downstream 1000 false chr4: 44025190-44026189 Medicago truncatula
Medtr4g106680 2.0kb upstream 2.0kb upstream 3292 true chr4: 44026190-44029481 Medicago truncatula
Medtr4g106680 2.0kb upstream 2.0kb upstream 2000 false chr4: 44027482-44029481 Medicago truncatula
Medtr4g106680 2.0kb downstream 2.0kb downstream 3292 true chr4: 44024190-44027481 Medicago truncatula
Medtr4g106680 2.0kb downstream 2.0kb downstream 2000 false chr4: 44024190-44026189 Medicago truncatula
Medtr4g106680 5.0kb upstream 5.0kb upstream 6292 true chr4: 44026190-44032481 Medicago truncatula
Medtr4g106680 5.0kb upstream 5.0kb upstream 5000 false chr4: 44027482-44032481 Medicago truncatula
Medtr4g106680 5.0kb downstream 5.0kb downstream 6292 true chr4: 44021190-44027481 Medicago truncatula
Medtr4g106680 5.0kb downstream 5.0kb downstream 5000 false chr4: 44021190-44026189 Medicago truncatula
Medtr4g106680 10.0kb upstream 10.0kb upstream 11292 true chr4: 44026190-44037481 Medicago truncatula
Medtr4g106680 10.0kb upstream 10.0kb upstream 10000 false chr4: 44027482-44037481 Medicago truncatula
Medtr4g106680 10.0kb downstream 10.0kb downstream 11292 true chr4: 44016190-44027481 Medicago truncatula
Medtr4g106680 10.0kb downstream 10.0kb downstream 10000 false chr4: 44016190-44026189 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041020 5273 Angiosperm View MSA
122316128 5265 Fabidae View MSA
124071790 5270 Rosid View MSA
123752396 5271 Pentapetalae View MSA
122790664 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.07       Low
cufflinks 0.742        
cufflinks 0.486        
cufflinks 0.29        
cufflinks 0.784        
cufflinks 0.095     Low Low
cufflinks 0.706        
cufflinks 0.592        
cufflinks 0.435        

0 Strain