Gene : Medtr4g106730 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22939//PTHR22939:SF85 - SERINE PROTEASE FAMILY S1C HTRA-RELATED Description:  serine endopeptidase degp2 protein, putative
Genomic Order:  5570 Name:  ? Medtr4g106730
Secondary Identifier:  ? PAC:31111895
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g106730 0.5kb upstream 0.5kb upstream 6043 true chr4: 44043150-44049192 Medicago truncatula
Medtr4g106730 0.5kb upstream 0.5kb upstream 500 false chr4: 44048693-44049192 Medicago truncatula
Medtr4g106730 0.5kb downstream 0.5kb downstream 6043 true chr4: 44042650-44048692 Medicago truncatula
Medtr4g106730 0.5kb downstream 0.5kb downstream 500 false chr4: 44042650-44043149 Medicago truncatula
Medtr4g106730 1.0kb upstream 1.0kb upstream 6543 true chr4: 44043150-44049692 Medicago truncatula
Medtr4g106730 1.0kb upstream 1.0kb upstream 1000 false chr4: 44048693-44049692 Medicago truncatula
Medtr4g106730 1.0kb downstream 1.0kb downstream 6543 true chr4: 44042150-44048692 Medicago truncatula
Medtr4g106730 1.0kb downstream 1.0kb downstream 1000 false chr4: 44042150-44043149 Medicago truncatula
Medtr4g106730 2.0kb upstream 2.0kb upstream 7543 true chr4: 44043150-44050692 Medicago truncatula
Medtr4g106730 2.0kb upstream 2.0kb upstream 2000 false chr4: 44048693-44050692 Medicago truncatula
Medtr4g106730 2.0kb downstream 2.0kb downstream 7543 true chr4: 44041150-44048692 Medicago truncatula
Medtr4g106730 2.0kb downstream 2.0kb downstream 2000 false chr4: 44041150-44043149 Medicago truncatula
Medtr4g106730 5.0kb upstream 5.0kb upstream 10543 true chr4: 44043150-44053692 Medicago truncatula
Medtr4g106730 5.0kb upstream 5.0kb upstream 5000 false chr4: 44048693-44053692 Medicago truncatula
Medtr4g106730 5.0kb downstream 5.0kb downstream 10543 true chr4: 44038150-44048692 Medicago truncatula
Medtr4g106730 5.0kb downstream 5.0kb downstream 5000 false chr4: 44038150-44043149 Medicago truncatula
Medtr4g106730 10.0kb upstream 10.0kb upstream 15543 true chr4: 44043150-44058692 Medicago truncatula
Medtr4g106730 10.0kb upstream 10.0kb upstream 10000 false chr4: 44048693-44058692 Medicago truncatula
Medtr4g106730 10.0kb downstream 10.0kb downstream 15543 true chr4: 44033150-44048692 Medicago truncatula
Medtr4g106730 10.0kb downstream 10.0kb downstream 10000 false chr4: 44033150-44043149 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310329 5265 Fabidae View MSA
124072965 5270 Rosid View MSA
123741119 5271 Pentapetalae View MSA
122794115 5272 Eudicot View MSA
122046723 5273 Angiosperm View MSA
121346662 5274 Embryophyte View MSA
123426440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.015        
cufflinks 2.054        
cufflinks 2.115        
cufflinks 3.524       High
cufflinks 2.4        
cufflinks 1.357       Low
cufflinks 2.503        
cufflinks 1.995        
cufflinks 3.622       High

0 Strain