Gene : Medtr4g107760 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10264:SF90 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 3 Description:  SPFH/band 7/PHB domain membrane-associated family protein
Genomic Order:  5643 Name:  ? Medtr4g107760
Secondary Identifier:  ? PAC:31109335
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g107760 0.5kb upstream 0.5kb upstream 4324 true chr4: 44651109-44655432 Medicago truncatula
Medtr4g107760 0.5kb upstream 0.5kb upstream 500 false chr4: 44651109-44651608 Medicago truncatula
Medtr4g107760 0.5kb downstream 0.5kb downstream 4324 true chr4: 44651609-44655932 Medicago truncatula
Medtr4g107760 0.5kb downstream 0.5kb downstream 500 false chr4: 44655433-44655932 Medicago truncatula
Medtr4g107760 1.0kb upstream 1.0kb upstream 4824 true chr4: 44650609-44655432 Medicago truncatula
Medtr4g107760 1.0kb upstream 1.0kb upstream 1000 false chr4: 44650609-44651608 Medicago truncatula
Medtr4g107760 1.0kb downstream 1.0kb downstream 4824 true chr4: 44651609-44656432 Medicago truncatula
Medtr4g107760 1.0kb downstream 1.0kb downstream 1000 false chr4: 44655433-44656432 Medicago truncatula
Medtr4g107760 2.0kb upstream 2.0kb upstream 5824 true chr4: 44649609-44655432 Medicago truncatula
Medtr4g107760 2.0kb upstream 2.0kb upstream 2000 false chr4: 44649609-44651608 Medicago truncatula
Medtr4g107760 2.0kb downstream 2.0kb downstream 5824 true chr4: 44651609-44657432 Medicago truncatula
Medtr4g107760 2.0kb downstream 2.0kb downstream 2000 false chr4: 44655433-44657432 Medicago truncatula
Medtr4g107760 5.0kb upstream 5.0kb upstream 8824 true chr4: 44646609-44655432 Medicago truncatula
Medtr4g107760 5.0kb upstream 5.0kb upstream 5000 false chr4: 44646609-44651608 Medicago truncatula
Medtr4g107760 5.0kb downstream 5.0kb downstream 8824 true chr4: 44651609-44660432 Medicago truncatula
Medtr4g107760 5.0kb downstream 5.0kb downstream 5000 false chr4: 44655433-44660432 Medicago truncatula
Medtr4g107760 10.0kb upstream 10.0kb upstream 13824 true chr4: 44641609-44655432 Medicago truncatula
Medtr4g107760 10.0kb upstream 10.0kb upstream 10000 false chr4: 44641609-44651608 Medicago truncatula
Medtr4g107760 10.0kb downstream 10.0kb downstream 13824 true chr4: 44651609-44665432 Medicago truncatula
Medtr4g107760 10.0kb downstream 10.0kb downstream 10000 false chr4: 44655433-44665432 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122261796 5265 Fabidae Singleton cluster - no MSA
124068988 5270 Rosid View MSA
123744628 5271 Pentapetalae View MSA
122796204 5272 Eudicot View MSA
122042629 5273 Angiosperm View MSA
121344543 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.049       High
cufflinks 0.27        
cufflinks 0.252       Low
cufflinks 1.471        
cufflinks 0.233       Low
cufflinks 3.215        
cufflinks 2.389        
cufflinks 0.264        
cufflinks 2.742        

0 Strain