Gene : Medtr4g107810 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10264:SF90 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 3 Description:  SPFH/band 7/PHB domain membrane-associated family protein
Genomic Order:  5647 Name:  ? Medtr4g107810
Secondary Identifier:  ? PAC:31112315
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g107810 0.5kb upstream 0.5kb upstream 4442 true chr4: 44679673-44684114 Medicago truncatula
Medtr4g107810 0.5kb upstream 0.5kb upstream 500 false chr4: 44679673-44680172 Medicago truncatula
Medtr4g107810 0.5kb downstream 0.5kb downstream 4442 true chr4: 44680173-44684614 Medicago truncatula
Medtr4g107810 0.5kb downstream 0.5kb downstream 500 false chr4: 44684115-44684614 Medicago truncatula
Medtr4g107810 1.0kb upstream 1.0kb upstream 4942 true chr4: 44679173-44684114 Medicago truncatula
Medtr4g107810 1.0kb upstream 1.0kb upstream 1000 false chr4: 44679173-44680172 Medicago truncatula
Medtr4g107810 1.0kb downstream 1.0kb downstream 4942 true chr4: 44680173-44685114 Medicago truncatula
Medtr4g107810 1.0kb downstream 1.0kb downstream 1000 false chr4: 44684115-44685114 Medicago truncatula
Medtr4g107810 2.0kb upstream 2.0kb upstream 5942 true chr4: 44678173-44684114 Medicago truncatula
Medtr4g107810 2.0kb upstream 2.0kb upstream 2000 false chr4: 44678173-44680172 Medicago truncatula
Medtr4g107810 2.0kb downstream 2.0kb downstream 5942 true chr4: 44680173-44686114 Medicago truncatula
Medtr4g107810 2.0kb downstream 2.0kb downstream 2000 false chr4: 44684115-44686114 Medicago truncatula
Medtr4g107810 5.0kb upstream 5.0kb upstream 8942 true chr4: 44675173-44684114 Medicago truncatula
Medtr4g107810 5.0kb upstream 5.0kb upstream 5000 false chr4: 44675173-44680172 Medicago truncatula
Medtr4g107810 5.0kb downstream 5.0kb downstream 8942 true chr4: 44680173-44689114 Medicago truncatula
Medtr4g107810 5.0kb downstream 5.0kb downstream 5000 false chr4: 44684115-44689114 Medicago truncatula
Medtr4g107810 10.0kb upstream 10.0kb upstream 13942 true chr4: 44670173-44684114 Medicago truncatula
Medtr4g107810 10.0kb upstream 10.0kb upstream 10000 false chr4: 44670173-44680172 Medicago truncatula
Medtr4g107810 10.0kb downstream 10.0kb downstream 13942 true chr4: 44680173-44694114 Medicago truncatula
Medtr4g107810 10.0kb downstream 10.0kb downstream 10000 false chr4: 44684115-44694114 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312030 5265 Fabidae View MSA
124068988 5270 Rosid View MSA
123744628 5271 Pentapetalae View MSA
122796204 5272 Eudicot View MSA
122042629 5273 Angiosperm View MSA
121344543 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.107       High
cufflinks 0.57        
cufflinks 0.443       Low
cufflinks 1.543        
cufflinks 0.491       Low
cufflinks 2.233        
cufflinks 2.712        
cufflinks 0.643        
cufflinks 3.16        

0 Strain