Gene : Medtr4g107330 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12428//PTHR12428:SF23 - OXA1 Description:  60 kDa inner membrane protein
Genomic Order:  5612 Name:  ? Medtr4g107330
Secondary Identifier:  ? PAC:31115127
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g107330 0.5kb upstream 0.5kb upstream 7539 true chr4: 44358306-44365844 Medicago truncatula
Medtr4g107330 0.5kb upstream 0.5kb upstream 500 false chr4: 44358306-44358805 Medicago truncatula
Medtr4g107330 0.5kb downstream 0.5kb downstream 7539 true chr4: 44358806-44366344 Medicago truncatula
Medtr4g107330 0.5kb downstream 0.5kb downstream 500 false chr4: 44365845-44366344 Medicago truncatula
Medtr4g107330 1.0kb upstream 1.0kb upstream 8039 true chr4: 44357806-44365844 Medicago truncatula
Medtr4g107330 1.0kb upstream 1.0kb upstream 1000 false chr4: 44357806-44358805 Medicago truncatula
Medtr4g107330 1.0kb downstream 1.0kb downstream 8039 true chr4: 44358806-44366844 Medicago truncatula
Medtr4g107330 1.0kb downstream 1.0kb downstream 1000 false chr4: 44365845-44366844 Medicago truncatula
Medtr4g107330 2.0kb upstream 2.0kb upstream 9039 true chr4: 44356806-44365844 Medicago truncatula
Medtr4g107330 2.0kb upstream 2.0kb upstream 2000 false chr4: 44356806-44358805 Medicago truncatula
Medtr4g107330 2.0kb downstream 2.0kb downstream 9039 true chr4: 44358806-44367844 Medicago truncatula
Medtr4g107330 2.0kb downstream 2.0kb downstream 2000 false chr4: 44365845-44367844 Medicago truncatula
Medtr4g107330 5.0kb upstream 5.0kb upstream 12039 true chr4: 44353806-44365844 Medicago truncatula
Medtr4g107330 5.0kb upstream 5.0kb upstream 5000 false chr4: 44353806-44358805 Medicago truncatula
Medtr4g107330 5.0kb downstream 5.0kb downstream 12039 true chr4: 44358806-44370844 Medicago truncatula
Medtr4g107330 5.0kb downstream 5.0kb downstream 5000 false chr4: 44365845-44370844 Medicago truncatula
Medtr4g107330 10.0kb upstream 10.0kb upstream 17039 true chr4: 44348806-44365844 Medicago truncatula
Medtr4g107330 10.0kb upstream 10.0kb upstream 10000 false chr4: 44348806-44358805 Medicago truncatula
Medtr4g107330 10.0kb downstream 10.0kb downstream 17039 true chr4: 44358806-44375844 Medicago truncatula
Medtr4g107330 10.0kb downstream 10.0kb downstream 10000 false chr4: 44365845-44375844 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311244 5265 Fabidae View MSA
124065140 5270 Rosid View MSA
123750990 5271 Pentapetalae View MSA
122794726 5272 Eudicot View MSA
122051610 5273 Angiosperm View MSA
121347323 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.401       Low
cufflinks 1.094        
cufflinks 1.025        
cufflinks 0.443        
cufflinks 2.037       High
cufflinks 0.464        
cufflinks 0.557        
cufflinks 0.858        
cufflinks 0.644        

0 Strain