Gene : Medtr4g108163 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR19229//PTHR19229:SF127 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA Description:  ABC transporter A family protein
Genomic Order:  5677 Name:  ? Medtr4g108163
Secondary Identifier:  ? PAC:31112612
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g108163 0.5kb upstream 0.5kb upstream 8434 true chr4: 44844462-44852895 Medicago truncatula
Medtr4g108163 0.5kb upstream 0.5kb upstream 500 false chr4: 44844462-44844961 Medicago truncatula
Medtr4g108163 0.5kb downstream 0.5kb downstream 8434 true chr4: 44844962-44853395 Medicago truncatula
Medtr4g108163 0.5kb downstream 0.5kb downstream 500 false chr4: 44852896-44853395 Medicago truncatula
Medtr4g108163 1.0kb upstream 1.0kb upstream 8934 true chr4: 44843962-44852895 Medicago truncatula
Medtr4g108163 1.0kb upstream 1.0kb upstream 1000 false chr4: 44843962-44844961 Medicago truncatula
Medtr4g108163 1.0kb downstream 1.0kb downstream 8934 true chr4: 44844962-44853895 Medicago truncatula
Medtr4g108163 1.0kb downstream 1.0kb downstream 1000 false chr4: 44852896-44853895 Medicago truncatula
Medtr4g108163 2.0kb upstream 2.0kb upstream 9934 true chr4: 44842962-44852895 Medicago truncatula
Medtr4g108163 2.0kb upstream 2.0kb upstream 2000 false chr4: 44842962-44844961 Medicago truncatula
Medtr4g108163 2.0kb downstream 2.0kb downstream 9934 true chr4: 44844962-44854895 Medicago truncatula
Medtr4g108163 2.0kb downstream 2.0kb downstream 2000 false chr4: 44852896-44854895 Medicago truncatula
Medtr4g108163 5.0kb upstream 5.0kb upstream 12934 true chr4: 44839962-44852895 Medicago truncatula
Medtr4g108163 5.0kb upstream 5.0kb upstream 5000 false chr4: 44839962-44844961 Medicago truncatula
Medtr4g108163 5.0kb downstream 5.0kb downstream 12934 true chr4: 44844962-44857895 Medicago truncatula
Medtr4g108163 5.0kb downstream 5.0kb downstream 5000 false chr4: 44852896-44857895 Medicago truncatula
Medtr4g108163 10.0kb upstream 10.0kb upstream 17934 true chr4: 44834962-44852895 Medicago truncatula
Medtr4g108163 10.0kb upstream 10.0kb upstream 10000 false chr4: 44834962-44844961 Medicago truncatula
Medtr4g108163 10.0kb downstream 10.0kb downstream 17934 true chr4: 44844962-44862895 Medicago truncatula
Medtr4g108163 10.0kb downstream 10.0kb downstream 10000 false chr4: 44852896-44862895 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041021 5273 Angiosperm View MSA
122309989 5265 Fabidae View MSA
124064975 5270 Rosid View MSA
123738851 5271 Pentapetalae View MSA
122789582 5272 Eudicot View MSA
123429075 5275 Viridiplantae View MSA
121349830 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.043     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain