Gene : Medtr4g108060 M. truncatula Mt4.0v1
Defline:  (1 of 599) PF13041 - PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  5669 Name:  ? Medtr4g108060
Secondary Identifier:  ? PAC:31111211
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g108060 0.5kb upstream 0.5kb upstream 2927 true chr4: 44788813-44791739 Medicago truncatula
Medtr4g108060 0.5kb upstream 0.5kb upstream 500 false chr4: 44791240-44791739 Medicago truncatula
Medtr4g108060 0.5kb downstream 0.5kb downstream 2927 true chr4: 44788313-44791239 Medicago truncatula
Medtr4g108060 0.5kb downstream 0.5kb downstream 500 false chr4: 44788313-44788812 Medicago truncatula
Medtr4g108060 1.0kb upstream 1.0kb upstream 3427 true chr4: 44788813-44792239 Medicago truncatula
Medtr4g108060 1.0kb upstream 1.0kb upstream 1000 false chr4: 44791240-44792239 Medicago truncatula
Medtr4g108060 1.0kb downstream 1.0kb downstream 3427 true chr4: 44787813-44791239 Medicago truncatula
Medtr4g108060 1.0kb downstream 1.0kb downstream 1000 false chr4: 44787813-44788812 Medicago truncatula
Medtr4g108060 2.0kb upstream 2.0kb upstream 4427 true chr4: 44788813-44793239 Medicago truncatula
Medtr4g108060 2.0kb upstream 2.0kb upstream 2000 false chr4: 44791240-44793239 Medicago truncatula
Medtr4g108060 2.0kb downstream 2.0kb downstream 4427 true chr4: 44786813-44791239 Medicago truncatula
Medtr4g108060 2.0kb downstream 2.0kb downstream 2000 false chr4: 44786813-44788812 Medicago truncatula
Medtr4g108060 5.0kb upstream 5.0kb upstream 7427 true chr4: 44788813-44796239 Medicago truncatula
Medtr4g108060 5.0kb upstream 5.0kb upstream 5000 false chr4: 44791240-44796239 Medicago truncatula
Medtr4g108060 5.0kb downstream 5.0kb downstream 7427 true chr4: 44783813-44791239 Medicago truncatula
Medtr4g108060 5.0kb downstream 5.0kb downstream 5000 false chr4: 44783813-44788812 Medicago truncatula
Medtr4g108060 10.0kb upstream 10.0kb upstream 12427 true chr4: 44788813-44801239 Medicago truncatula
Medtr4g108060 10.0kb upstream 10.0kb upstream 10000 false chr4: 44791240-44801239 Medicago truncatula
Medtr4g108060 10.0kb downstream 10.0kb downstream 12427 true chr4: 44778813-44791239 Medicago truncatula
Medtr4g108060 10.0kb downstream 10.0kb downstream 10000 false chr4: 44778813-44788812 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302641 5265 Fabidae View MSA
124067693 5270 Rosid View MSA
123738221 5271 Pentapetalae View MSA
122794420 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.739        
cufflinks 1.567        
cufflinks 1.862        
cufflinks 0.39       Low
cufflinks 1.595        
cufflinks 0.365       Low
cufflinks 0.856        
cufflinks 1.655        
cufflinks 0.376       Low

0 Strain