Gene : Medtr4g107860 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11527//PTHR11527:SF121 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY Description:  hsp20/alpha crystallin family protein
Genomic Order:  5652 Name:  ? Medtr4g107860
Secondary Identifier:  ? PAC:31108957
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g107860 0.5kb upstream 0.5kb upstream 1771 true chr4: 44703683-44705453 Medicago truncatula
Medtr4g107860 0.5kb upstream 0.5kb upstream 500 false chr4: 44704954-44705453 Medicago truncatula
Medtr4g107860 0.5kb downstream 0.5kb downstream 1771 true chr4: 44703183-44704953 Medicago truncatula
Medtr4g107860 0.5kb downstream 0.5kb downstream 500 false chr4: 44703183-44703682 Medicago truncatula
Medtr4g107860 1.0kb upstream 1.0kb upstream 2271 true chr4: 44703683-44705953 Medicago truncatula
Medtr4g107860 1.0kb upstream 1.0kb upstream 1000 false chr4: 44704954-44705953 Medicago truncatula
Medtr4g107860 1.0kb downstream 1.0kb downstream 2271 true chr4: 44702683-44704953 Medicago truncatula
Medtr4g107860 1.0kb downstream 1.0kb downstream 1000 false chr4: 44702683-44703682 Medicago truncatula
Medtr4g107860 2.0kb upstream 2.0kb upstream 3271 true chr4: 44703683-44706953 Medicago truncatula
Medtr4g107860 2.0kb upstream 2.0kb upstream 2000 false chr4: 44704954-44706953 Medicago truncatula
Medtr4g107860 2.0kb downstream 2.0kb downstream 3271 true chr4: 44701683-44704953 Medicago truncatula
Medtr4g107860 2.0kb downstream 2.0kb downstream 2000 false chr4: 44701683-44703682 Medicago truncatula
Medtr4g107860 5.0kb upstream 5.0kb upstream 6271 true chr4: 44703683-44709953 Medicago truncatula
Medtr4g107860 5.0kb upstream 5.0kb upstream 5000 false chr4: 44704954-44709953 Medicago truncatula
Medtr4g107860 5.0kb downstream 5.0kb downstream 6271 true chr4: 44698683-44704953 Medicago truncatula
Medtr4g107860 5.0kb downstream 5.0kb downstream 5000 false chr4: 44698683-44703682 Medicago truncatula
Medtr4g107860 10.0kb upstream 10.0kb upstream 11271 true chr4: 44703683-44714953 Medicago truncatula
Medtr4g107860 10.0kb upstream 10.0kb upstream 10000 false chr4: 44704954-44714953 Medicago truncatula
Medtr4g107860 10.0kb downstream 10.0kb downstream 11271 true chr4: 44693683-44704953 Medicago truncatula
Medtr4g107860 10.0kb downstream 10.0kb downstream 10000 false chr4: 44693683-44703682 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309456 5265 Fabidae View MSA
124069899 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.113       Low
cufflinks 1.217        
cufflinks 0.836        
cufflinks 1.562        
cufflinks 0.857        
cufflinks 1.347        
cufflinks 2.233        
cufflinks 0.972        
cufflinks 2.23        

0 Strain