Gene : Medtr4g107840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11743//PTHR11743:SF35 - VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL Description:  porin/voltage-dependent anion-selective channel protein
Genomic Order:  5650 Name:  ? Medtr4g107840
Secondary Identifier:  ? PAC:31108180
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g107840 0.5kb upstream 0.5kb upstream 2331 true chr4: 44694242-44696572 Medicago truncatula
Medtr4g107840 0.5kb upstream 0.5kb upstream 500 false chr4: 44696073-44696572 Medicago truncatula
Medtr4g107840 0.5kb downstream 0.5kb downstream 2331 true chr4: 44693742-44696072 Medicago truncatula
Medtr4g107840 0.5kb downstream 0.5kb downstream 500 false chr4: 44693742-44694241 Medicago truncatula
Medtr4g107840 1.0kb upstream 1.0kb upstream 2831 true chr4: 44694242-44697072 Medicago truncatula
Medtr4g107840 1.0kb upstream 1.0kb upstream 1000 false chr4: 44696073-44697072 Medicago truncatula
Medtr4g107840 1.0kb downstream 1.0kb downstream 2831 true chr4: 44693242-44696072 Medicago truncatula
Medtr4g107840 1.0kb downstream 1.0kb downstream 1000 false chr4: 44693242-44694241 Medicago truncatula
Medtr4g107840 2.0kb upstream 2.0kb upstream 3831 true chr4: 44694242-44698072 Medicago truncatula
Medtr4g107840 2.0kb upstream 2.0kb upstream 2000 false chr4: 44696073-44698072 Medicago truncatula
Medtr4g107840 2.0kb downstream 2.0kb downstream 3831 true chr4: 44692242-44696072 Medicago truncatula
Medtr4g107840 2.0kb downstream 2.0kb downstream 2000 false chr4: 44692242-44694241 Medicago truncatula
Medtr4g107840 5.0kb upstream 5.0kb upstream 6831 true chr4: 44694242-44701072 Medicago truncatula
Medtr4g107840 5.0kb upstream 5.0kb upstream 5000 false chr4: 44696073-44701072 Medicago truncatula
Medtr4g107840 5.0kb downstream 5.0kb downstream 6831 true chr4: 44689242-44696072 Medicago truncatula
Medtr4g107840 5.0kb downstream 5.0kb downstream 5000 false chr4: 44689242-44694241 Medicago truncatula
Medtr4g107840 10.0kb upstream 10.0kb upstream 11831 true chr4: 44694242-44706072 Medicago truncatula
Medtr4g107840 10.0kb upstream 10.0kb upstream 10000 false chr4: 44696073-44706072 Medicago truncatula
Medtr4g107840 10.0kb downstream 10.0kb downstream 11831 true chr4: 44684242-44696072 Medicago truncatula
Medtr4g107840 10.0kb downstream 10.0kb downstream 10000 false chr4: 44684242-44694241 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779426 5273 Angiosperm View MSA
122306284 5265 Fabidae View MSA
124071402 5270 Rosid View MSA
123742820 5271 Pentapetalae View MSA
122770402 5272 Eudicot View MSA
121051087 5274 Embryophyte View MSA
123091193 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.65        
cufflinks 0.418        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.901        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.522        
cufflinks 0.089     Low Low

0 Strain