Gene : Medtr4g108260 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10091:SF3 - ALDOSE 1-EPIMERASE Description:  aldose 1-epimerase family protein
Genomic Order:  5685 Name:  ? Medtr4g108260
Secondary Identifier:  ? PAC:31109567
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY66-422 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g108260 0.5kb upstream 0.5kb upstream 2569 true chr4: 44905859-44908427 Medicago truncatula
Medtr4g108260 0.5kb upstream 0.5kb upstream 500 false chr4: 44905859-44906358 Medicago truncatula
Medtr4g108260 0.5kb downstream 0.5kb downstream 2569 true chr4: 44906359-44908927 Medicago truncatula
Medtr4g108260 0.5kb downstream 0.5kb downstream 500 false chr4: 44908428-44908927 Medicago truncatula
Medtr4g108260 1.0kb upstream 1.0kb upstream 3069 true chr4: 44905359-44908427 Medicago truncatula
Medtr4g108260 1.0kb upstream 1.0kb upstream 1000 false chr4: 44905359-44906358 Medicago truncatula
Medtr4g108260 1.0kb downstream 1.0kb downstream 3069 true chr4: 44906359-44909427 Medicago truncatula
Medtr4g108260 1.0kb downstream 1.0kb downstream 1000 false chr4: 44908428-44909427 Medicago truncatula
Medtr4g108260 2.0kb upstream 2.0kb upstream 4069 true chr4: 44904359-44908427 Medicago truncatula
Medtr4g108260 2.0kb upstream 2.0kb upstream 2000 false chr4: 44904359-44906358 Medicago truncatula
Medtr4g108260 2.0kb downstream 2.0kb downstream 4069 true chr4: 44906359-44910427 Medicago truncatula
Medtr4g108260 2.0kb downstream 2.0kb downstream 2000 false chr4: 44908428-44910427 Medicago truncatula
Medtr4g108260 5.0kb upstream 5.0kb upstream 7069 true chr4: 44901359-44908427 Medicago truncatula
Medtr4g108260 5.0kb upstream 5.0kb upstream 5000 false chr4: 44901359-44906358 Medicago truncatula
Medtr4g108260 5.0kb downstream 5.0kb downstream 7069 true chr4: 44906359-44913427 Medicago truncatula
Medtr4g108260 5.0kb downstream 5.0kb downstream 5000 false chr4: 44908428-44913427 Medicago truncatula
Medtr4g108260 10.0kb upstream 10.0kb upstream 12069 true chr4: 44896359-44908427 Medicago truncatula
Medtr4g108260 10.0kb upstream 10.0kb upstream 10000 false chr4: 44896359-44906358 Medicago truncatula
Medtr4g108260 10.0kb downstream 10.0kb downstream 12069 true chr4: 44906359-44918427 Medicago truncatula
Medtr4g108260 10.0kb downstream 10.0kb downstream 10000 false chr4: 44908428-44918427 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308782 5265 Fabidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.278     High Low
cufflinks 64.068     High  
cufflinks 74.071     High  
cufflinks 19.844     High Low
cufflinks 38.076     High  
cufflinks 40.137     High  
cufflinks 43.446     High  
cufflinks 124.67     High High
cufflinks 23.675     High  

0 Strain