Gene : Medtr4g108360 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23042:SF51 - TRANSCRIPTION FACTOR BHLH47 Description:  BHLH transcription factor
Genomic Order:  5693 Name:  ? Medtr4g108360
Secondary Identifier:  ? PAC:31111689
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g108360 0.5kb upstream 0.5kb upstream 2930 true chr4: 44948167-44951096 Medicago truncatula
Medtr4g108360 0.5kb upstream 0.5kb upstream 500 false chr4: 44950597-44951096 Medicago truncatula
Medtr4g108360 0.5kb downstream 0.5kb downstream 2930 true chr4: 44947667-44950596 Medicago truncatula
Medtr4g108360 0.5kb downstream 0.5kb downstream 500 false chr4: 44947667-44948166 Medicago truncatula
Medtr4g108360 1.0kb upstream 1.0kb upstream 3430 true chr4: 44948167-44951596 Medicago truncatula
Medtr4g108360 1.0kb upstream 1.0kb upstream 1000 false chr4: 44950597-44951596 Medicago truncatula
Medtr4g108360 1.0kb downstream 1.0kb downstream 3430 true chr4: 44947167-44950596 Medicago truncatula
Medtr4g108360 1.0kb downstream 1.0kb downstream 1000 false chr4: 44947167-44948166 Medicago truncatula
Medtr4g108360 2.0kb upstream 2.0kb upstream 4430 true chr4: 44948167-44952596 Medicago truncatula
Medtr4g108360 2.0kb upstream 2.0kb upstream 2000 false chr4: 44950597-44952596 Medicago truncatula
Medtr4g108360 2.0kb downstream 2.0kb downstream 4430 true chr4: 44946167-44950596 Medicago truncatula
Medtr4g108360 2.0kb downstream 2.0kb downstream 2000 false chr4: 44946167-44948166 Medicago truncatula
Medtr4g108360 5.0kb upstream 5.0kb upstream 7430 true chr4: 44948167-44955596 Medicago truncatula
Medtr4g108360 5.0kb upstream 5.0kb upstream 5000 false chr4: 44950597-44955596 Medicago truncatula
Medtr4g108360 5.0kb downstream 5.0kb downstream 7430 true chr4: 44943167-44950596 Medicago truncatula
Medtr4g108360 5.0kb downstream 5.0kb downstream 5000 false chr4: 44943167-44948166 Medicago truncatula
Medtr4g108360 10.0kb upstream 10.0kb upstream 12430 true chr4: 44948167-44960596 Medicago truncatula
Medtr4g108360 10.0kb upstream 10.0kb upstream 10000 false chr4: 44950597-44960596 Medicago truncatula
Medtr4g108360 10.0kb downstream 10.0kb downstream 12430 true chr4: 44938167-44950596 Medicago truncatula
Medtr4g108360 10.0kb downstream 10.0kb downstream 10000 false chr4: 44938167-44948166 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308621 5265 Fabidae View MSA
124071212 5270 Rosid View MSA
123743361 5271 Pentapetalae View MSA
122787264 5272 Eudicot View MSA
122043647 5273 Angiosperm View MSA
121351586 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.654        
cufflinks 5.274       Low
cufflinks 7.623        
cufflinks 11.924     High  
cufflinks 5.473       Low
cufflinks 16.999     High High
cufflinks 12.756     High  
cufflinks 5.206       Low
cufflinks 9.372        

0 Strain