Gene : Medtr4g100870 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR13402 - RGPR-RELATED Description:  RGPR-like protein
Genomic Order:  5248 Name:  ? Medtr4g100870
Secondary Identifier:  ? PAC:31108313
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g100870 0.5kb upstream 0.5kb upstream 8498 true chr4: 41640653-41649150 Medicago truncatula
Medtr4g100870 0.5kb upstream 0.5kb upstream 500 false chr4: 41640653-41641152 Medicago truncatula
Medtr4g100870 0.5kb downstream 0.5kb downstream 8498 true chr4: 41641153-41649650 Medicago truncatula
Medtr4g100870 0.5kb downstream 0.5kb downstream 500 false chr4: 41649151-41649650 Medicago truncatula
Medtr4g100870 1.0kb upstream 1.0kb upstream 8998 true chr4: 41640153-41649150 Medicago truncatula
Medtr4g100870 1.0kb upstream 1.0kb upstream 1000 false chr4: 41640153-41641152 Medicago truncatula
Medtr4g100870 1.0kb downstream 1.0kb downstream 8998 true chr4: 41641153-41650150 Medicago truncatula
Medtr4g100870 1.0kb downstream 1.0kb downstream 1000 false chr4: 41649151-41650150 Medicago truncatula
Medtr4g100870 2.0kb upstream 2.0kb upstream 9998 true chr4: 41639153-41649150 Medicago truncatula
Medtr4g100870 2.0kb upstream 2.0kb upstream 2000 false chr4: 41639153-41641152 Medicago truncatula
Medtr4g100870 2.0kb downstream 2.0kb downstream 9998 true chr4: 41641153-41651150 Medicago truncatula
Medtr4g100870 2.0kb downstream 2.0kb downstream 2000 false chr4: 41649151-41651150 Medicago truncatula
Medtr4g100870 5.0kb upstream 5.0kb upstream 12998 true chr4: 41636153-41649150 Medicago truncatula
Medtr4g100870 5.0kb upstream 5.0kb upstream 5000 false chr4: 41636153-41641152 Medicago truncatula
Medtr4g100870 5.0kb downstream 5.0kb downstream 12998 true chr4: 41641153-41654150 Medicago truncatula
Medtr4g100870 5.0kb downstream 5.0kb downstream 5000 false chr4: 41649151-41654150 Medicago truncatula
Medtr4g100870 10.0kb upstream 10.0kb upstream 17998 true chr4: 41631153-41649150 Medicago truncatula
Medtr4g100870 10.0kb upstream 10.0kb upstream 10000 false chr4: 41631153-41641152 Medicago truncatula
Medtr4g100870 10.0kb downstream 10.0kb downstream 17998 true chr4: 41641153-41659150 Medicago truncatula
Medtr4g100870 10.0kb downstream 10.0kb downstream 10000 false chr4: 41649151-41659150 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301249 5265 Fabidae View MSA
124072884 5270 Rosid View MSA
123746128 5271 Pentapetalae View MSA
122793039 5272 Eudicot View MSA
122051498 5273 Angiosperm View MSA
121349781 5274 Embryophyte View MSA
123425826 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.576        
cufflinks 6.832       High
cufflinks 6.06        
cufflinks 0.927       Low
cufflinks 7.247       High
cufflinks 1.283       Low
cufflinks 2.625        
cufflinks 4.75        
cufflinks 3.075        

0 Strain