Gene : Medtr4g104085 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33159:SF4 - RPM1-INTERACTING PROTEIN 4 FAMILY PROTEIN Description:  RPM1-interacting protein 4 (RIN4) family protein
Genomic Order:  5443 Name:  ? Medtr4g104085
Secondary Identifier:  ? PAC:31109847
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g104085 0.5kb upstream 0.5kb upstream 3418 true chr4: 43086477-43089894 Medicago truncatula
Medtr4g104085 0.5kb upstream 0.5kb upstream 500 false chr4: 43086477-43086976 Medicago truncatula
Medtr4g104085 0.5kb downstream 0.5kb downstream 3418 true chr4: 43086977-43090394 Medicago truncatula
Medtr4g104085 0.5kb downstream 0.5kb downstream 500 false chr4: 43089895-43090394 Medicago truncatula
Medtr4g104085 1.0kb upstream 1.0kb upstream 3918 true chr4: 43085977-43089894 Medicago truncatula
Medtr4g104085 1.0kb upstream 1.0kb upstream 1000 false chr4: 43085977-43086976 Medicago truncatula
Medtr4g104085 1.0kb downstream 1.0kb downstream 3918 true chr4: 43086977-43090894 Medicago truncatula
Medtr4g104085 1.0kb downstream 1.0kb downstream 1000 false chr4: 43089895-43090894 Medicago truncatula
Medtr4g104085 2.0kb upstream 2.0kb upstream 4918 true chr4: 43084977-43089894 Medicago truncatula
Medtr4g104085 2.0kb upstream 2.0kb upstream 2000 false chr4: 43084977-43086976 Medicago truncatula
Medtr4g104085 2.0kb downstream 2.0kb downstream 4918 true chr4: 43086977-43091894 Medicago truncatula
Medtr4g104085 2.0kb downstream 2.0kb downstream 2000 false chr4: 43089895-43091894 Medicago truncatula
Medtr4g104085 5.0kb upstream 5.0kb upstream 7918 true chr4: 43081977-43089894 Medicago truncatula
Medtr4g104085 5.0kb upstream 5.0kb upstream 5000 false chr4: 43081977-43086976 Medicago truncatula
Medtr4g104085 5.0kb downstream 5.0kb downstream 7918 true chr4: 43086977-43094894 Medicago truncatula
Medtr4g104085 5.0kb downstream 5.0kb downstream 5000 false chr4: 43089895-43094894 Medicago truncatula
Medtr4g104085 10.0kb upstream 10.0kb upstream 12918 true chr4: 43076977-43089894 Medicago truncatula
Medtr4g104085 10.0kb upstream 10.0kb upstream 10000 false chr4: 43076977-43086976 Medicago truncatula
Medtr4g104085 10.0kb downstream 10.0kb downstream 12918 true chr4: 43086977-43099894 Medicago truncatula
Medtr4g104085 10.0kb downstream 10.0kb downstream 10000 false chr4: 43089895-43099894 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310699 5265 Fabidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.07        
cufflinks 0.028     Low  
cufflinks 0.008     Low Low
cufflinks 0.041     Low  
cufflinks 0.021     Low  
cufflinks 0.881       High
cufflinks 0.098        
cufflinks 0.027     Low  
cufflinks 0.013     Low  

0 Strain