Gene : Medtr4g101420 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR14969:SF13 - AT30094P Description:  phosphatidic acid phosphatase (PAP2) family protein
Genomic Order:  5284 Name:  ? Medtr4g101420
Secondary Identifier:  ? PAC:31110637
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula TRIGLSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g101420 0.5kb upstream 0.5kb upstream 4846 true chr4: 41926100-41930945 Medicago truncatula
Medtr4g101420 0.5kb upstream 0.5kb upstream 500 false chr4: 41930446-41930945 Medicago truncatula
Medtr4g101420 0.5kb downstream 0.5kb downstream 4846 true chr4: 41925600-41930445 Medicago truncatula
Medtr4g101420 0.5kb downstream 0.5kb downstream 500 false chr4: 41925600-41926099 Medicago truncatula
Medtr4g101420 1.0kb upstream 1.0kb upstream 5346 true chr4: 41926100-41931445 Medicago truncatula
Medtr4g101420 1.0kb upstream 1.0kb upstream 1000 false chr4: 41930446-41931445 Medicago truncatula
Medtr4g101420 1.0kb downstream 1.0kb downstream 5346 true chr4: 41925100-41930445 Medicago truncatula
Medtr4g101420 1.0kb downstream 1.0kb downstream 1000 false chr4: 41925100-41926099 Medicago truncatula
Medtr4g101420 2.0kb upstream 2.0kb upstream 6346 true chr4: 41926100-41932445 Medicago truncatula
Medtr4g101420 2.0kb upstream 2.0kb upstream 2000 false chr4: 41930446-41932445 Medicago truncatula
Medtr4g101420 2.0kb downstream 2.0kb downstream 6346 true chr4: 41924100-41930445 Medicago truncatula
Medtr4g101420 2.0kb downstream 2.0kb downstream 2000 false chr4: 41924100-41926099 Medicago truncatula
Medtr4g101420 5.0kb upstream 5.0kb upstream 9346 true chr4: 41926100-41935445 Medicago truncatula
Medtr4g101420 5.0kb upstream 5.0kb upstream 5000 false chr4: 41930446-41935445 Medicago truncatula
Medtr4g101420 5.0kb downstream 5.0kb downstream 9346 true chr4: 41921100-41930445 Medicago truncatula
Medtr4g101420 5.0kb downstream 5.0kb downstream 5000 false chr4: 41921100-41926099 Medicago truncatula
Medtr4g101420 10.0kb upstream 10.0kb upstream 14346 true chr4: 41926100-41940445 Medicago truncatula
Medtr4g101420 10.0kb upstream 10.0kb upstream 10000 false chr4: 41930446-41940445 Medicago truncatula
Medtr4g101420 10.0kb downstream 10.0kb downstream 14346 true chr4: 41916100-41930445 Medicago truncatula
Medtr4g101420 10.0kb downstream 10.0kb downstream 10000 false chr4: 41916100-41926099 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301882 5265 Fabidae View MSA
124068093 5270 Rosid View MSA
123737030 5271 Pentapetalae View MSA
122788421 5272 Eudicot View MSA
122043486 5273 Angiosperm View MSA
121349083 5274 Embryophyte View MSA
123381157 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.26       Low
cufflinks 0.507        
cufflinks 0.442        
cufflinks 1.388       High
cufflinks 0.445        
cufflinks 0.969        
cufflinks 0.735        
cufflinks 0.472        
cufflinks 1.004        

0 Strain