Gene : Medtr4g101100 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF04073 - Aminoacyl-tRNA editing domain (tRNA_edit) Description:  YbaK/proline-tRNA ligase associated domain protein
Genomic Order:  5266 Name:  ? Medtr4g101100
Secondary Identifier:  ? PAC:31111693
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g101100 0.5kb upstream 0.5kb upstream 3999 true chr4: 41755918-41759916 Medicago truncatula
Medtr4g101100 0.5kb upstream 0.5kb upstream 500 false chr4: 41759417-41759916 Medicago truncatula
Medtr4g101100 0.5kb downstream 0.5kb downstream 3999 true chr4: 41755418-41759416 Medicago truncatula
Medtr4g101100 0.5kb downstream 0.5kb downstream 500 false chr4: 41755418-41755917 Medicago truncatula
Medtr4g101100 1.0kb upstream 1.0kb upstream 4499 true chr4: 41755918-41760416 Medicago truncatula
Medtr4g101100 1.0kb upstream 1.0kb upstream 1000 false chr4: 41759417-41760416 Medicago truncatula
Medtr4g101100 1.0kb downstream 1.0kb downstream 4499 true chr4: 41754918-41759416 Medicago truncatula
Medtr4g101100 1.0kb downstream 1.0kb downstream 1000 false chr4: 41754918-41755917 Medicago truncatula
Medtr4g101100 2.0kb upstream 2.0kb upstream 5499 true chr4: 41755918-41761416 Medicago truncatula
Medtr4g101100 2.0kb upstream 2.0kb upstream 2000 false chr4: 41759417-41761416 Medicago truncatula
Medtr4g101100 2.0kb downstream 2.0kb downstream 5499 true chr4: 41753918-41759416 Medicago truncatula
Medtr4g101100 2.0kb downstream 2.0kb downstream 2000 false chr4: 41753918-41755917 Medicago truncatula
Medtr4g101100 5.0kb upstream 5.0kb upstream 8499 true chr4: 41755918-41764416 Medicago truncatula
Medtr4g101100 5.0kb upstream 5.0kb upstream 5000 false chr4: 41759417-41764416 Medicago truncatula
Medtr4g101100 5.0kb downstream 5.0kb downstream 8499 true chr4: 41750918-41759416 Medicago truncatula
Medtr4g101100 5.0kb downstream 5.0kb downstream 5000 false chr4: 41750918-41755917 Medicago truncatula
Medtr4g101100 10.0kb upstream 10.0kb upstream 13499 true chr4: 41755918-41769416 Medicago truncatula
Medtr4g101100 10.0kb upstream 10.0kb upstream 10000 false chr4: 41759417-41769416 Medicago truncatula
Medtr4g101100 10.0kb downstream 10.0kb downstream 13499 true chr4: 41745918-41759416 Medicago truncatula
Medtr4g101100 10.0kb downstream 10.0kb downstream 10000 false chr4: 41745918-41755917 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300572 5265 Fabidae View MSA
124069035 5270 Rosid View MSA
123740763 5271 Pentapetalae View MSA
122788934 5272 Eudicot View MSA
122045827 5273 Angiosperm View MSA
121345961 5274 Embryophyte View MSA
123425466 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.433        
cufflinks 0.469        
cufflinks 0.465        
cufflinks 1.121        
cufflinks 0.846        
cufflinks 1.364       High
cufflinks 0.744        
cufflinks 0.379       Low
cufflinks 1.597       High

0 Strain