Gene : Medtr4g086260 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR10891//PTHR10891:SF533 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Description:  EF hand calcium-binding family protein
Genomic Order:  4244 Name:  ? Medtr4g086260
Secondary Identifier:  ? PAC:31110065
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g086260 0.5kb upstream 0.5kb upstream 1812 true chr4: 33774930-33776741 Medicago truncatula
Medtr4g086260 0.5kb upstream 0.5kb upstream 500 false chr4: 33774930-33775429 Medicago truncatula
Medtr4g086260 0.5kb downstream 0.5kb downstream 1812 true chr4: 33775430-33777241 Medicago truncatula
Medtr4g086260 0.5kb downstream 0.5kb downstream 500 false chr4: 33776742-33777241 Medicago truncatula
Medtr4g086260 1.0kb upstream 1.0kb upstream 2312 true chr4: 33774430-33776741 Medicago truncatula
Medtr4g086260 1.0kb upstream 1.0kb upstream 1000 false chr4: 33774430-33775429 Medicago truncatula
Medtr4g086260 1.0kb downstream 1.0kb downstream 2312 true chr4: 33775430-33777741 Medicago truncatula
Medtr4g086260 1.0kb downstream 1.0kb downstream 1000 false chr4: 33776742-33777741 Medicago truncatula
Medtr4g086260 2.0kb upstream 2.0kb upstream 3312 true chr4: 33773430-33776741 Medicago truncatula
Medtr4g086260 2.0kb upstream 2.0kb upstream 2000 false chr4: 33773430-33775429 Medicago truncatula
Medtr4g086260 2.0kb downstream 2.0kb downstream 3312 true chr4: 33775430-33778741 Medicago truncatula
Medtr4g086260 2.0kb downstream 2.0kb downstream 2000 false chr4: 33776742-33778741 Medicago truncatula
Medtr4g086260 5.0kb upstream 5.0kb upstream 6312 true chr4: 33770430-33776741 Medicago truncatula
Medtr4g086260 5.0kb upstream 5.0kb upstream 5000 false chr4: 33770430-33775429 Medicago truncatula
Medtr4g086260 5.0kb downstream 5.0kb downstream 6312 true chr4: 33775430-33781741 Medicago truncatula
Medtr4g086260 5.0kb downstream 5.0kb downstream 5000 false chr4: 33776742-33781741 Medicago truncatula
Medtr4g086260 10.0kb upstream 10.0kb upstream 11312 true chr4: 33765430-33776741 Medicago truncatula
Medtr4g086260 10.0kb upstream 10.0kb upstream 10000 false chr4: 33765430-33775429 Medicago truncatula
Medtr4g086260 10.0kb downstream 10.0kb downstream 11312 true chr4: 33775430-33786741 Medicago truncatula
Medtr4g086260 10.0kb downstream 10.0kb downstream 10000 false chr4: 33776742-33786741 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302168 5265 Fabidae View MSA
124064178 5270 Rosid View MSA
123753496 5271 Pentapetalae View MSA
122789442 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.071       Low
cufflinks 20.112     High  
cufflinks 25.272     High High
cufflinks 8.24        
cufflinks 24.38     High  
cufflinks 7.148        
cufflinks 12.39     High  
cufflinks 22.577     High  
cufflinks 9.128        

0 Strain