Gene : Medtr4g087090 M. truncatula Mt4.0v1
Defline:  (1 of 10) PTHR10209//PTHR10209:SF98 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN Description:  senescence-associated nodulin
Genomic Order:  4285 Name:  ? Medtr4g087090
Secondary Identifier:  ? PAC:31108719
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g087090 0.5kb upstream 0.5kb upstream 2130 true chr4: 34119188-34121317 Medicago truncatula
Medtr4g087090 0.5kb upstream 0.5kb upstream 500 false chr4: 34120818-34121317 Medicago truncatula
Medtr4g087090 0.5kb downstream 0.5kb downstream 2130 true chr4: 34118688-34120817 Medicago truncatula
Medtr4g087090 0.5kb downstream 0.5kb downstream 500 false chr4: 34118688-34119187 Medicago truncatula
Medtr4g087090 1.0kb upstream 1.0kb upstream 2630 true chr4: 34119188-34121817 Medicago truncatula
Medtr4g087090 1.0kb upstream 1.0kb upstream 1000 false chr4: 34120818-34121817 Medicago truncatula
Medtr4g087090 1.0kb downstream 1.0kb downstream 2630 true chr4: 34118188-34120817 Medicago truncatula
Medtr4g087090 1.0kb downstream 1.0kb downstream 1000 false chr4: 34118188-34119187 Medicago truncatula
Medtr4g087090 2.0kb upstream 2.0kb upstream 3630 true chr4: 34119188-34122817 Medicago truncatula
Medtr4g087090 2.0kb upstream 2.0kb upstream 2000 false chr4: 34120818-34122817 Medicago truncatula
Medtr4g087090 2.0kb downstream 2.0kb downstream 3630 true chr4: 34117188-34120817 Medicago truncatula
Medtr4g087090 2.0kb downstream 2.0kb downstream 2000 false chr4: 34117188-34119187 Medicago truncatula
Medtr4g087090 5.0kb upstream 5.0kb upstream 6630 true chr4: 34119188-34125817 Medicago truncatula
Medtr4g087090 5.0kb upstream 5.0kb upstream 5000 false chr4: 34120818-34125817 Medicago truncatula
Medtr4g087090 5.0kb downstream 5.0kb downstream 6630 true chr4: 34114188-34120817 Medicago truncatula
Medtr4g087090 5.0kb downstream 5.0kb downstream 5000 false chr4: 34114188-34119187 Medicago truncatula
Medtr4g087090 10.0kb upstream 10.0kb upstream 11630 true chr4: 34119188-34130817 Medicago truncatula
Medtr4g087090 10.0kb upstream 10.0kb upstream 10000 false chr4: 34120818-34130817 Medicago truncatula
Medtr4g087090 10.0kb downstream 10.0kb downstream 11630 true chr4: 34109188-34120817 Medicago truncatula
Medtr4g087090 10.0kb downstream 10.0kb downstream 10000 false chr4: 34109188-34119187 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296819 5265 Fabidae View MSA
124035794 5270 Rosid View MSA
123609256 5271 Pentapetalae View MSA
122643905 5272 Eudicot View MSA
122043362 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121349353 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.045     Low  
cufflinks 0.022     Low  
cufflinks 0.023     Low  
cufflinks 0.073       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.007     Low Low
cufflinks 0.059     Low  

0 Strain