Gene : Medtr4g086660 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR24349//PTHR24349:SF115 - SERINE/THREONINE-PROTEIN KINASE Description:  calmodulin-domain kinase CDPK protein
Genomic Order:  4269 Name:  ? Medtr4g086660
Secondary Identifier:  ? PAC:31109798
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g086660 0.5kb upstream 0.5kb upstream 6286 true chr4: 33966651-33972936 Medicago truncatula
Medtr4g086660 0.5kb upstream 0.5kb upstream 500 false chr4: 33972437-33972936 Medicago truncatula
Medtr4g086660 0.5kb downstream 0.5kb downstream 6286 true chr4: 33966151-33972436 Medicago truncatula
Medtr4g086660 0.5kb downstream 0.5kb downstream 500 false chr4: 33966151-33966650 Medicago truncatula
Medtr4g086660 1.0kb upstream 1.0kb upstream 6786 true chr4: 33966651-33973436 Medicago truncatula
Medtr4g086660 1.0kb upstream 1.0kb upstream 1000 false chr4: 33972437-33973436 Medicago truncatula
Medtr4g086660 1.0kb downstream 1.0kb downstream 6786 true chr4: 33965651-33972436 Medicago truncatula
Medtr4g086660 1.0kb downstream 1.0kb downstream 1000 false chr4: 33965651-33966650 Medicago truncatula
Medtr4g086660 2.0kb upstream 2.0kb upstream 7786 true chr4: 33966651-33974436 Medicago truncatula
Medtr4g086660 2.0kb upstream 2.0kb upstream 2000 false chr4: 33972437-33974436 Medicago truncatula
Medtr4g086660 2.0kb downstream 2.0kb downstream 7786 true chr4: 33964651-33972436 Medicago truncatula
Medtr4g086660 2.0kb downstream 2.0kb downstream 2000 false chr4: 33964651-33966650 Medicago truncatula
Medtr4g086660 5.0kb upstream 5.0kb upstream 10786 true chr4: 33966651-33977436 Medicago truncatula
Medtr4g086660 5.0kb upstream 5.0kb upstream 5000 false chr4: 33972437-33977436 Medicago truncatula
Medtr4g086660 5.0kb downstream 5.0kb downstream 10786 true chr4: 33961651-33972436 Medicago truncatula
Medtr4g086660 5.0kb downstream 5.0kb downstream 5000 false chr4: 33961651-33966650 Medicago truncatula
Medtr4g086660 10.0kb upstream 10.0kb upstream 15786 true chr4: 33966651-33982436 Medicago truncatula
Medtr4g086660 10.0kb upstream 10.0kb upstream 10000 false chr4: 33972437-33982436 Medicago truncatula
Medtr4g086660 10.0kb downstream 10.0kb downstream 15786 true chr4: 33956651-33972436 Medicago truncatula
Medtr4g086660 10.0kb downstream 10.0kb downstream 10000 false chr4: 33956651-33966650 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307585 5265 Fabidae View MSA
124071242 5270 Rosid View MSA
123749473 5271 Pentapetalae View MSA
122789222 5272 Eudicot View MSA
122047045 5273 Angiosperm View MSA
121343860 5274 Embryophyte View MSA
123379933 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.46       Low
cufflinks 8.615        
cufflinks 6.351        
cufflinks 3.603        
cufflinks 9.497       High
cufflinks 1.651       Low
cufflinks 5.039        
cufflinks 5.941        
cufflinks 5.425        

0 Strain