Gene : Medtr4g087510 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10314:SF110 - CYSTEINE SYNTHASE Description:  O-acetylserine (thiol) lyase
Genomic Order:  4313 Name:  ? Medtr4g087510
Secondary Identifier:  ? PAC:31114083
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CYSTSYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-6936 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g087510 0.5kb upstream 0.5kb upstream 3406 true chr4: 34356050-34359455 Medicago truncatula
Medtr4g087510 0.5kb upstream 0.5kb upstream 500 false chr4: 34358956-34359455 Medicago truncatula
Medtr4g087510 0.5kb downstream 0.5kb downstream 3406 true chr4: 34355550-34358955 Medicago truncatula
Medtr4g087510 0.5kb downstream 0.5kb downstream 500 false chr4: 34355550-34356049 Medicago truncatula
Medtr4g087510 1.0kb upstream 1.0kb upstream 3906 true chr4: 34356050-34359955 Medicago truncatula
Medtr4g087510 1.0kb upstream 1.0kb upstream 1000 false chr4: 34358956-34359955 Medicago truncatula
Medtr4g087510 1.0kb downstream 1.0kb downstream 3906 true chr4: 34355050-34358955 Medicago truncatula
Medtr4g087510 1.0kb downstream 1.0kb downstream 1000 false chr4: 34355050-34356049 Medicago truncatula
Medtr4g087510 2.0kb upstream 2.0kb upstream 4906 true chr4: 34356050-34360955 Medicago truncatula
Medtr4g087510 2.0kb upstream 2.0kb upstream 2000 false chr4: 34358956-34360955 Medicago truncatula
Medtr4g087510 2.0kb downstream 2.0kb downstream 4906 true chr4: 34354050-34358955 Medicago truncatula
Medtr4g087510 2.0kb downstream 2.0kb downstream 2000 false chr4: 34354050-34356049 Medicago truncatula
Medtr4g087510 5.0kb upstream 5.0kb upstream 7906 true chr4: 34356050-34363955 Medicago truncatula
Medtr4g087510 5.0kb upstream 5.0kb upstream 5000 false chr4: 34358956-34363955 Medicago truncatula
Medtr4g087510 5.0kb downstream 5.0kb downstream 7906 true chr4: 34351050-34358955 Medicago truncatula
Medtr4g087510 5.0kb downstream 5.0kb downstream 5000 false chr4: 34351050-34356049 Medicago truncatula
Medtr4g087510 10.0kb upstream 10.0kb upstream 12906 true chr4: 34356050-34368955 Medicago truncatula
Medtr4g087510 10.0kb upstream 10.0kb upstream 10000 false chr4: 34358956-34368955 Medicago truncatula
Medtr4g087510 10.0kb downstream 10.0kb downstream 12906 true chr4: 34346050-34358955 Medicago truncatula
Medtr4g087510 10.0kb downstream 10.0kb downstream 10000 false chr4: 34346050-34356049 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303096 5265 Fabidae View MSA
124068226 5270 Rosid View MSA
123737517 5271 Pentapetalae View MSA
122787269 5272 Eudicot View MSA
122042312 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.454        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.316        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.375        

0 Strain