Gene : Medtr4g087270 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13237:SF8 - SOMETHING ABOUT SILENCING PROTEIN 10 Description:  Sas10/U3 ribonucleoprotein (UTP) family protein, putative
Genomic Order:  4296 Name:  ? Medtr4g087270
Secondary Identifier:  ? PAC:31115303
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g087270 0.5kb upstream 0.5kb upstream 8106 true chr4: 34217803-34225908 Medicago truncatula
Medtr4g087270 0.5kb upstream 0.5kb upstream 500 false chr4: 34217803-34218302 Medicago truncatula
Medtr4g087270 0.5kb downstream 0.5kb downstream 8106 true chr4: 34218303-34226408 Medicago truncatula
Medtr4g087270 0.5kb downstream 0.5kb downstream 500 false chr4: 34225909-34226408 Medicago truncatula
Medtr4g087270 1.0kb upstream 1.0kb upstream 8606 true chr4: 34217303-34225908 Medicago truncatula
Medtr4g087270 1.0kb upstream 1.0kb upstream 1000 false chr4: 34217303-34218302 Medicago truncatula
Medtr4g087270 1.0kb downstream 1.0kb downstream 8606 true chr4: 34218303-34226908 Medicago truncatula
Medtr4g087270 1.0kb downstream 1.0kb downstream 1000 false chr4: 34225909-34226908 Medicago truncatula
Medtr4g087270 2.0kb upstream 2.0kb upstream 9606 true chr4: 34216303-34225908 Medicago truncatula
Medtr4g087270 2.0kb upstream 2.0kb upstream 2000 false chr4: 34216303-34218302 Medicago truncatula
Medtr4g087270 2.0kb downstream 2.0kb downstream 9606 true chr4: 34218303-34227908 Medicago truncatula
Medtr4g087270 2.0kb downstream 2.0kb downstream 2000 false chr4: 34225909-34227908 Medicago truncatula
Medtr4g087270 5.0kb upstream 5.0kb upstream 12606 true chr4: 34213303-34225908 Medicago truncatula
Medtr4g087270 5.0kb upstream 5.0kb upstream 5000 false chr4: 34213303-34218302 Medicago truncatula
Medtr4g087270 5.0kb downstream 5.0kb downstream 12606 true chr4: 34218303-34230908 Medicago truncatula
Medtr4g087270 5.0kb downstream 5.0kb downstream 5000 false chr4: 34225909-34230908 Medicago truncatula
Medtr4g087270 10.0kb upstream 10.0kb upstream 17606 true chr4: 34208303-34225908 Medicago truncatula
Medtr4g087270 10.0kb upstream 10.0kb upstream 10000 false chr4: 34208303-34218302 Medicago truncatula
Medtr4g087270 10.0kb downstream 10.0kb downstream 17606 true chr4: 34218303-34235908 Medicago truncatula
Medtr4g087270 10.0kb downstream 10.0kb downstream 10000 false chr4: 34225909-34235908 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027842 5273 Angiosperm View MSA
122303276 5265 Fabidae View MSA
124067196 5270 Rosid View MSA
123744956 5271 Pentapetalae View MSA
122793458 5272 Eudicot View MSA
121344490 5274 Embryophyte View MSA
123424280 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.413        
cufflinks 2.321        
cufflinks 3.924       High
cufflinks 0.784       Low
cufflinks 4.111       High
cufflinks 0.348       Low
cufflinks 1.621        
cufflinks 2.919        
cufflinks 1.327        

0 Strain