Gene : Medtr4g087210 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR22999:SF23 - SORTING NEXIN-16 Description:  sorting nexin carboxy-terminal protein
Genomic Order:  4293 Name:  ? Medtr4g087210
Secondary Identifier:  ? PAC:31106450
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g087210 0.5kb upstream 0.5kb upstream 12116 true chr4: 34163477-34175592 Medicago truncatula
Medtr4g087210 0.5kb upstream 0.5kb upstream 500 false chr4: 34163477-34163976 Medicago truncatula
Medtr4g087210 0.5kb downstream 0.5kb downstream 12116 true chr4: 34163977-34176092 Medicago truncatula
Medtr4g087210 0.5kb downstream 0.5kb downstream 500 false chr4: 34175593-34176092 Medicago truncatula
Medtr4g087210 1.0kb upstream 1.0kb upstream 12616 true chr4: 34162977-34175592 Medicago truncatula
Medtr4g087210 1.0kb upstream 1.0kb upstream 1000 false chr4: 34162977-34163976 Medicago truncatula
Medtr4g087210 1.0kb downstream 1.0kb downstream 12616 true chr4: 34163977-34176592 Medicago truncatula
Medtr4g087210 1.0kb downstream 1.0kb downstream 1000 false chr4: 34175593-34176592 Medicago truncatula
Medtr4g087210 2.0kb upstream 2.0kb upstream 13616 true chr4: 34161977-34175592 Medicago truncatula
Medtr4g087210 2.0kb upstream 2.0kb upstream 2000 false chr4: 34161977-34163976 Medicago truncatula
Medtr4g087210 2.0kb downstream 2.0kb downstream 13616 true chr4: 34163977-34177592 Medicago truncatula
Medtr4g087210 2.0kb downstream 2.0kb downstream 2000 false chr4: 34175593-34177592 Medicago truncatula
Medtr4g087210 5.0kb upstream 5.0kb upstream 16616 true chr4: 34158977-34175592 Medicago truncatula
Medtr4g087210 5.0kb upstream 5.0kb upstream 5000 false chr4: 34158977-34163976 Medicago truncatula
Medtr4g087210 5.0kb downstream 5.0kb downstream 16616 true chr4: 34163977-34180592 Medicago truncatula
Medtr4g087210 5.0kb downstream 5.0kb downstream 5000 false chr4: 34175593-34180592 Medicago truncatula
Medtr4g087210 10.0kb upstream 10.0kb upstream 21616 true chr4: 34153977-34175592 Medicago truncatula
Medtr4g087210 10.0kb upstream 10.0kb upstream 10000 false chr4: 34153977-34163976 Medicago truncatula
Medtr4g087210 10.0kb downstream 10.0kb downstream 21616 true chr4: 34163977-34185592 Medicago truncatula
Medtr4g087210 10.0kb downstream 10.0kb downstream 10000 false chr4: 34175593-34185592 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303562 5265 Fabidae View MSA
124063177 5270 Rosid View MSA
123744623 5271 Pentapetalae View MSA
122786474 5272 Eudicot View MSA
122049546 5273 Angiosperm View MSA
121349142 5274 Embryophyte View MSA
123426415 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.97        
cufflinks 2.365        
cufflinks 3.43       High
cufflinks 0.534       Low
cufflinks 2.703        
cufflinks 0.716       Low
cufflinks 1.159        
cufflinks 2.973        
cufflinks 0.894        

0 Strain