Gene : Medtr4g088115 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF05129 - Transcription elongation factor Elf1 like (Elf1) Description:  transcription elongation factor-like protein
Genomic Order:  4363 Name:  ? Medtr4g088115
Secondary Identifier:  ? PAC:31114092
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g088115 0.5kb upstream 0.5kb upstream 2918 true chr4: 34718052-34720969 Medicago truncatula
Medtr4g088115 0.5kb upstream 0.5kb upstream 500 false chr4: 34718052-34718551 Medicago truncatula
Medtr4g088115 0.5kb downstream 0.5kb downstream 2918 true chr4: 34718552-34721469 Medicago truncatula
Medtr4g088115 0.5kb downstream 0.5kb downstream 500 false chr4: 34720970-34721469 Medicago truncatula
Medtr4g088115 1.0kb upstream 1.0kb upstream 3418 true chr4: 34717552-34720969 Medicago truncatula
Medtr4g088115 1.0kb upstream 1.0kb upstream 1000 false chr4: 34717552-34718551 Medicago truncatula
Medtr4g088115 1.0kb downstream 1.0kb downstream 3418 true chr4: 34718552-34721969 Medicago truncatula
Medtr4g088115 1.0kb downstream 1.0kb downstream 1000 false chr4: 34720970-34721969 Medicago truncatula
Medtr4g088115 2.0kb upstream 2.0kb upstream 4418 true chr4: 34716552-34720969 Medicago truncatula
Medtr4g088115 2.0kb upstream 2.0kb upstream 2000 false chr4: 34716552-34718551 Medicago truncatula
Medtr4g088115 2.0kb downstream 2.0kb downstream 4418 true chr4: 34718552-34722969 Medicago truncatula
Medtr4g088115 2.0kb downstream 2.0kb downstream 2000 false chr4: 34720970-34722969 Medicago truncatula
Medtr4g088115 5.0kb upstream 5.0kb upstream 7418 true chr4: 34713552-34720969 Medicago truncatula
Medtr4g088115 5.0kb upstream 5.0kb upstream 5000 false chr4: 34713552-34718551 Medicago truncatula
Medtr4g088115 5.0kb downstream 5.0kb downstream 7418 true chr4: 34718552-34725969 Medicago truncatula
Medtr4g088115 5.0kb downstream 5.0kb downstream 5000 false chr4: 34720970-34725969 Medicago truncatula
Medtr4g088115 10.0kb upstream 10.0kb upstream 12418 true chr4: 34708552-34720969 Medicago truncatula
Medtr4g088115 10.0kb upstream 10.0kb upstream 10000 false chr4: 34708552-34718551 Medicago truncatula
Medtr4g088115 10.0kb downstream 10.0kb downstream 12418 true chr4: 34718552-34730969 Medicago truncatula
Medtr4g088115 10.0kb downstream 10.0kb downstream 10000 false chr4: 34720970-34730969 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310094 5265 Fabidae View MSA
124072024 5270 Rosid View MSA
123744235 5271 Pentapetalae View MSA
122794873 5272 Eudicot View MSA
122050937 5273 Angiosperm View MSA
121347501 5274 Embryophyte View MSA
123425183 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.877     High  
cufflinks 22.06     High  
cufflinks 22.736     High  
cufflinks 48.778     High High
cufflinks 27.897     High  
cufflinks 58.918     High High
cufflinks 33.136     High  
cufflinks 19.513     High Low
cufflinks 32.28     High  

0 Strain