Gene : Medtr4g088090 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR24073:SF553 - RAS-RELATED PROTEIN RABA1G Description:  RAB GTPase-like protein A1D
Genomic Order:  4360 Name:  ? Medtr4g088090
Secondary Identifier:  ? PAC:31107786
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g088090 0.5kb upstream 0.5kb upstream 3326 true chr4: 34698816-34702141 Medicago truncatula
Medtr4g088090 0.5kb upstream 0.5kb upstream 500 false chr4: 34698816-34699315 Medicago truncatula
Medtr4g088090 0.5kb downstream 0.5kb downstream 3326 true chr4: 34699316-34702641 Medicago truncatula
Medtr4g088090 0.5kb downstream 0.5kb downstream 500 false chr4: 34702142-34702641 Medicago truncatula
Medtr4g088090 1.0kb upstream 1.0kb upstream 3826 true chr4: 34698316-34702141 Medicago truncatula
Medtr4g088090 1.0kb upstream 1.0kb upstream 1000 false chr4: 34698316-34699315 Medicago truncatula
Medtr4g088090 1.0kb downstream 1.0kb downstream 3826 true chr4: 34699316-34703141 Medicago truncatula
Medtr4g088090 1.0kb downstream 1.0kb downstream 1000 false chr4: 34702142-34703141 Medicago truncatula
Medtr4g088090 2.0kb upstream 2.0kb upstream 4826 true chr4: 34697316-34702141 Medicago truncatula
Medtr4g088090 2.0kb upstream 2.0kb upstream 2000 false chr4: 34697316-34699315 Medicago truncatula
Medtr4g088090 2.0kb downstream 2.0kb downstream 4826 true chr4: 34699316-34704141 Medicago truncatula
Medtr4g088090 2.0kb downstream 2.0kb downstream 2000 false chr4: 34702142-34704141 Medicago truncatula
Medtr4g088090 5.0kb upstream 5.0kb upstream 7826 true chr4: 34694316-34702141 Medicago truncatula
Medtr4g088090 5.0kb upstream 5.0kb upstream 5000 false chr4: 34694316-34699315 Medicago truncatula
Medtr4g088090 5.0kb downstream 5.0kb downstream 7826 true chr4: 34699316-34707141 Medicago truncatula
Medtr4g088090 5.0kb downstream 5.0kb downstream 5000 false chr4: 34702142-34707141 Medicago truncatula
Medtr4g088090 10.0kb upstream 10.0kb upstream 12826 true chr4: 34689316-34702141 Medicago truncatula
Medtr4g088090 10.0kb upstream 10.0kb upstream 10000 false chr4: 34689316-34699315 Medicago truncatula
Medtr4g088090 10.0kb downstream 10.0kb downstream 12826 true chr4: 34699316-34712141 Medicago truncatula
Medtr4g088090 10.0kb downstream 10.0kb downstream 10000 false chr4: 34702142-34712141 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314290 5265 Fabidae View MSA
124074374 5270 Rosid View MSA
123750734 5271 Pentapetalae View MSA
122796076 5272 Eudicot View MSA
122042184 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.916       Low
cufflinks 2.21        
cufflinks 2.662        
cufflinks 1.856        
cufflinks 2.373        
cufflinks 1.645        
cufflinks 2.942        
cufflinks 2.488        
cufflinks 3.036        

0 Strain