Gene : Medtr4g088220 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG2037 - Guanylate-binding protein Description:  guanylate-binding family protein
Genomic Order:  4378 Name:  ? Medtr4g088220
Secondary Identifier:  ? PAC:31114862
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g088220 0.5kb upstream 0.5kb upstream 8816 true chr4: 34807336-34816151 Medicago truncatula
Medtr4g088220 0.5kb upstream 0.5kb upstream 500 false chr4: 34807336-34807835 Medicago truncatula
Medtr4g088220 0.5kb downstream 0.5kb downstream 8816 true chr4: 34807836-34816651 Medicago truncatula
Medtr4g088220 0.5kb downstream 0.5kb downstream 500 false chr4: 34816152-34816651 Medicago truncatula
Medtr4g088220 1.0kb upstream 1.0kb upstream 9316 true chr4: 34806836-34816151 Medicago truncatula
Medtr4g088220 1.0kb upstream 1.0kb upstream 1000 false chr4: 34806836-34807835 Medicago truncatula
Medtr4g088220 1.0kb downstream 1.0kb downstream 9316 true chr4: 34807836-34817151 Medicago truncatula
Medtr4g088220 1.0kb downstream 1.0kb downstream 1000 false chr4: 34816152-34817151 Medicago truncatula
Medtr4g088220 2.0kb upstream 2.0kb upstream 10316 true chr4: 34805836-34816151 Medicago truncatula
Medtr4g088220 2.0kb upstream 2.0kb upstream 2000 false chr4: 34805836-34807835 Medicago truncatula
Medtr4g088220 2.0kb downstream 2.0kb downstream 10316 true chr4: 34807836-34818151 Medicago truncatula
Medtr4g088220 2.0kb downstream 2.0kb downstream 2000 false chr4: 34816152-34818151 Medicago truncatula
Medtr4g088220 5.0kb upstream 5.0kb upstream 13316 true chr4: 34802836-34816151 Medicago truncatula
Medtr4g088220 5.0kb upstream 5.0kb upstream 5000 false chr4: 34802836-34807835 Medicago truncatula
Medtr4g088220 5.0kb downstream 5.0kb downstream 13316 true chr4: 34807836-34821151 Medicago truncatula
Medtr4g088220 5.0kb downstream 5.0kb downstream 5000 false chr4: 34816152-34821151 Medicago truncatula
Medtr4g088220 10.0kb upstream 10.0kb upstream 18316 true chr4: 34797836-34816151 Medicago truncatula
Medtr4g088220 10.0kb upstream 10.0kb upstream 10000 false chr4: 34797836-34807835 Medicago truncatula
Medtr4g088220 10.0kb downstream 10.0kb downstream 18316 true chr4: 34807836-34826151 Medicago truncatula
Medtr4g088220 10.0kb downstream 10.0kb downstream 10000 false chr4: 34816152-34826151 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300087 5265 Fabidae View MSA
124050265 5270 Rosid View MSA
123747703 5271 Pentapetalae View MSA
122791372 5272 Eudicot View MSA
122041640 5273 Angiosperm View MSA
121347884 5274 Embryophyte View MSA
123426529 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.193     High High
cufflinks 5.765        
cufflinks 5.121        
cufflinks 4.0       Low
cufflinks 7.338        
cufflinks 4.373        
cufflinks 8.997        
cufflinks 4.384        
cufflinks 7.841        

0 Strain