Gene : Medtr4g088505 M. truncatula Mt4.0v1
Defline:  (1 of 9) KOG3399 - Predicted Yippee-type zinc-binding protein Description:  yippee family zinc-binding protein, putative
Genomic Order:  4415 Name:  ? Medtr4g088505
Secondary Identifier:  ? PAC:31108137
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g088505 0.5kb upstream 0.5kb upstream 4237 true chr4: 35123302-35127538 Medicago truncatula
Medtr4g088505 0.5kb upstream 0.5kb upstream 500 false chr4: 35123302-35123801 Medicago truncatula
Medtr4g088505 0.5kb downstream 0.5kb downstream 4237 true chr4: 35123802-35128038 Medicago truncatula
Medtr4g088505 0.5kb downstream 0.5kb downstream 500 false chr4: 35127539-35128038 Medicago truncatula
Medtr4g088505 1.0kb upstream 1.0kb upstream 4737 true chr4: 35122802-35127538 Medicago truncatula
Medtr4g088505 1.0kb upstream 1.0kb upstream 1000 false chr4: 35122802-35123801 Medicago truncatula
Medtr4g088505 1.0kb downstream 1.0kb downstream 4737 true chr4: 35123802-35128538 Medicago truncatula
Medtr4g088505 1.0kb downstream 1.0kb downstream 1000 false chr4: 35127539-35128538 Medicago truncatula
Medtr4g088505 2.0kb upstream 2.0kb upstream 5737 true chr4: 35121802-35127538 Medicago truncatula
Medtr4g088505 2.0kb upstream 2.0kb upstream 2000 false chr4: 35121802-35123801 Medicago truncatula
Medtr4g088505 2.0kb downstream 2.0kb downstream 5737 true chr4: 35123802-35129538 Medicago truncatula
Medtr4g088505 2.0kb downstream 2.0kb downstream 2000 false chr4: 35127539-35129538 Medicago truncatula
Medtr4g088505 5.0kb upstream 5.0kb upstream 8737 true chr4: 35118802-35127538 Medicago truncatula
Medtr4g088505 5.0kb upstream 5.0kb upstream 5000 false chr4: 35118802-35123801 Medicago truncatula
Medtr4g088505 5.0kb downstream 5.0kb downstream 8737 true chr4: 35123802-35132538 Medicago truncatula
Medtr4g088505 5.0kb downstream 5.0kb downstream 5000 false chr4: 35127539-35132538 Medicago truncatula
Medtr4g088505 10.0kb upstream 10.0kb upstream 13737 true chr4: 35113802-35127538 Medicago truncatula
Medtr4g088505 10.0kb upstream 10.0kb upstream 10000 false chr4: 35113802-35123801 Medicago truncatula
Medtr4g088505 10.0kb downstream 10.0kb downstream 13737 true chr4: 35123802-35137538 Medicago truncatula
Medtr4g088505 10.0kb downstream 10.0kb downstream 10000 false chr4: 35127539-35137538 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041250 5273 Angiosperm View MSA
122300498 5265 Fabidae View MSA
124066251 5270 Rosid View MSA
123749273 5271 Pentapetalae View MSA
122792066 5272 Eudicot View MSA
123428914 5275 Viridiplantae View MSA
121350900 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.335        
cufflinks 2.265        
cufflinks 2.761        
cufflinks 3.167        
cufflinks 2.36        
cufflinks 4.779       High
cufflinks 4.762       High
cufflinks 2.28        
cufflinks 3.969        

0 Strain