Gene : Medtr4g088500 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR33199:SF8 - MACPF DOMAIN-CONTAINING PROTEIN NSL1 Description:  MACPF domain NSL1-like protein
Genomic Order:  4414 Name:  ? Medtr4g088500
Secondary Identifier:  ? PAC:31111947
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g088500 0.5kb upstream 0.5kb upstream 4066 true chr4: 35114937-35119002 Medicago truncatula
Medtr4g088500 0.5kb upstream 0.5kb upstream 500 false chr4: 35118503-35119002 Medicago truncatula
Medtr4g088500 0.5kb downstream 0.5kb downstream 4066 true chr4: 35114437-35118502 Medicago truncatula
Medtr4g088500 0.5kb downstream 0.5kb downstream 500 false chr4: 35114437-35114936 Medicago truncatula
Medtr4g088500 1.0kb upstream 1.0kb upstream 4566 true chr4: 35114937-35119502 Medicago truncatula
Medtr4g088500 1.0kb upstream 1.0kb upstream 1000 false chr4: 35118503-35119502 Medicago truncatula
Medtr4g088500 1.0kb downstream 1.0kb downstream 4566 true chr4: 35113937-35118502 Medicago truncatula
Medtr4g088500 1.0kb downstream 1.0kb downstream 1000 false chr4: 35113937-35114936 Medicago truncatula
Medtr4g088500 2.0kb upstream 2.0kb upstream 5566 true chr4: 35114937-35120502 Medicago truncatula
Medtr4g088500 2.0kb upstream 2.0kb upstream 2000 false chr4: 35118503-35120502 Medicago truncatula
Medtr4g088500 2.0kb downstream 2.0kb downstream 5566 true chr4: 35112937-35118502 Medicago truncatula
Medtr4g088500 2.0kb downstream 2.0kb downstream 2000 false chr4: 35112937-35114936 Medicago truncatula
Medtr4g088500 5.0kb upstream 5.0kb upstream 8566 true chr4: 35114937-35123502 Medicago truncatula
Medtr4g088500 5.0kb upstream 5.0kb upstream 5000 false chr4: 35118503-35123502 Medicago truncatula
Medtr4g088500 5.0kb downstream 5.0kb downstream 8566 true chr4: 35109937-35118502 Medicago truncatula
Medtr4g088500 5.0kb downstream 5.0kb downstream 5000 false chr4: 35109937-35114936 Medicago truncatula
Medtr4g088500 10.0kb upstream 10.0kb upstream 13566 true chr4: 35114937-35128502 Medicago truncatula
Medtr4g088500 10.0kb upstream 10.0kb upstream 10000 false chr4: 35118503-35128502 Medicago truncatula
Medtr4g088500 10.0kb downstream 10.0kb downstream 13566 true chr4: 35104937-35118502 Medicago truncatula
Medtr4g088500 10.0kb downstream 10.0kb downstream 10000 false chr4: 35104937-35114936 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303313 5265 Fabidae View MSA
124061147 5270 Rosid View MSA
123738184 5271 Pentapetalae View MSA
122791371 5272 Eudicot View MSA
122048917 5273 Angiosperm View MSA
121311170 5274 Embryophyte View MSA
123348503 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.915     High High
cufflinks 10.818     High  
cufflinks 35.627     High  
cufflinks 4.992       Low
cufflinks 14.981     High  
cufflinks 15.619     High  
cufflinks 45.873     High High
cufflinks 14.774     High  
cufflinks 33.566     High  

0 Strain