Gene : Medtr4g088920 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11361:SF14 - DNA MISMATCH REPAIR PROTEIN MUTS2 Description:  DNA mismatch repair protein MutS2
Genomic Order:  4479 Name:  ? Medtr4g088920
Secondary Identifier:  ? PAC:31113781
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g088920 0.5kb upstream 0.5kb upstream 5608 true chr4: 35512675-35518282 Medicago truncatula
Medtr4g088920 0.5kb upstream 0.5kb upstream 500 false chr4: 35517783-35518282 Medicago truncatula
Medtr4g088920 0.5kb downstream 0.5kb downstream 5608 true chr4: 35512175-35517782 Medicago truncatula
Medtr4g088920 0.5kb downstream 0.5kb downstream 500 false chr4: 35512175-35512674 Medicago truncatula
Medtr4g088920 1.0kb upstream 1.0kb upstream 6108 true chr4: 35512675-35518782 Medicago truncatula
Medtr4g088920 1.0kb upstream 1.0kb upstream 1000 false chr4: 35517783-35518782 Medicago truncatula
Medtr4g088920 1.0kb downstream 1.0kb downstream 6108 true chr4: 35511675-35517782 Medicago truncatula
Medtr4g088920 1.0kb downstream 1.0kb downstream 1000 false chr4: 35511675-35512674 Medicago truncatula
Medtr4g088920 2.0kb upstream 2.0kb upstream 7108 true chr4: 35512675-35519782 Medicago truncatula
Medtr4g088920 2.0kb upstream 2.0kb upstream 2000 false chr4: 35517783-35519782 Medicago truncatula
Medtr4g088920 2.0kb downstream 2.0kb downstream 7108 true chr4: 35510675-35517782 Medicago truncatula
Medtr4g088920 2.0kb downstream 2.0kb downstream 2000 false chr4: 35510675-35512674 Medicago truncatula
Medtr4g088920 5.0kb upstream 5.0kb upstream 10108 true chr4: 35512675-35522782 Medicago truncatula
Medtr4g088920 5.0kb upstream 5.0kb upstream 5000 false chr4: 35517783-35522782 Medicago truncatula
Medtr4g088920 5.0kb downstream 5.0kb downstream 10108 true chr4: 35507675-35517782 Medicago truncatula
Medtr4g088920 5.0kb downstream 5.0kb downstream 5000 false chr4: 35507675-35512674 Medicago truncatula
Medtr4g088920 10.0kb upstream 10.0kb upstream 15108 true chr4: 35512675-35527782 Medicago truncatula
Medtr4g088920 10.0kb upstream 10.0kb upstream 10000 false chr4: 35517783-35527782 Medicago truncatula
Medtr4g088920 10.0kb downstream 10.0kb downstream 15108 true chr4: 35502675-35517782 Medicago truncatula
Medtr4g088920 10.0kb downstream 10.0kb downstream 10000 false chr4: 35502675-35512674 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306620 5265 Fabidae View MSA
124073530 5270 Rosid View MSA
123739589 5271 Pentapetalae View MSA
122790305 5272 Eudicot View MSA
122044988 5273 Angiosperm View MSA
121346721 5274 Embryophyte View MSA
123426571 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.176        
cufflinks 2.645        
cufflinks 3.542       High
cufflinks 0.102       Low
cufflinks 5.369       High
cufflinks 0.155        
cufflinks 0.304        
cufflinks 3.053        
cufflinks 0.195        

0 Strain