Gene : Medtr4g088695 M. truncatula Mt4.0v1
Defline:  (1 of 35) PF05678 - VQ motif (VQ) Description:  VQ motif protein
Genomic Order:  4445 Name:  ? Medtr4g088695
Secondary Identifier:  ? PAC:31113879
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g088695 0.5kb upstream 0.5kb upstream 1740 true chr4: 35302060-35303799 Medicago truncatula
Medtr4g088695 0.5kb upstream 0.5kb upstream 500 false chr4: 35303300-35303799 Medicago truncatula
Medtr4g088695 0.5kb downstream 0.5kb downstream 1740 true chr4: 35301560-35303299 Medicago truncatula
Medtr4g088695 0.5kb downstream 0.5kb downstream 500 false chr4: 35301560-35302059 Medicago truncatula
Medtr4g088695 1.0kb upstream 1.0kb upstream 2240 true chr4: 35302060-35304299 Medicago truncatula
Medtr4g088695 1.0kb upstream 1.0kb upstream 1000 false chr4: 35303300-35304299 Medicago truncatula
Medtr4g088695 1.0kb downstream 1.0kb downstream 2240 true chr4: 35301060-35303299 Medicago truncatula
Medtr4g088695 1.0kb downstream 1.0kb downstream 1000 false chr4: 35301060-35302059 Medicago truncatula
Medtr4g088695 2.0kb upstream 2.0kb upstream 3240 true chr4: 35302060-35305299 Medicago truncatula
Medtr4g088695 2.0kb upstream 2.0kb upstream 2000 false chr4: 35303300-35305299 Medicago truncatula
Medtr4g088695 2.0kb downstream 2.0kb downstream 3240 true chr4: 35300060-35303299 Medicago truncatula
Medtr4g088695 2.0kb downstream 2.0kb downstream 2000 false chr4: 35300060-35302059 Medicago truncatula
Medtr4g088695 5.0kb upstream 5.0kb upstream 6240 true chr4: 35302060-35308299 Medicago truncatula
Medtr4g088695 5.0kb upstream 5.0kb upstream 5000 false chr4: 35303300-35308299 Medicago truncatula
Medtr4g088695 5.0kb downstream 5.0kb downstream 6240 true chr4: 35297060-35303299 Medicago truncatula
Medtr4g088695 5.0kb downstream 5.0kb downstream 5000 false chr4: 35297060-35302059 Medicago truncatula
Medtr4g088695 10.0kb upstream 10.0kb upstream 11240 true chr4: 35302060-35313299 Medicago truncatula
Medtr4g088695 10.0kb upstream 10.0kb upstream 10000 false chr4: 35303300-35313299 Medicago truncatula
Medtr4g088695 10.0kb downstream 10.0kb downstream 11240 true chr4: 35292060-35303299 Medicago truncatula
Medtr4g088695 10.0kb downstream 10.0kb downstream 10000 false chr4: 35292060-35302059 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307242 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.604     High Low
cufflinks 15.132     High Low
cufflinks 22.509     High  
cufflinks 37.045     High High
cufflinks 21.428     High  
cufflinks 20.27     High  
cufflinks 24.837     High  
cufflinks 19.188     High  
cufflinks 24.508     High  

0 Strain