Gene : Medtr4g088770 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31579:SF11 - EXPRESSED PROTEIN Description:  plant-specific domain TIGR01615 family protein
Genomic Order:  4457 Name:  ? Medtr4g088770
Secondary Identifier:  ? PAC:31115216
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g088770 0.5kb upstream 0.5kb upstream 2308 true chr4: 35372760-35375067 Medicago truncatula
Medtr4g088770 0.5kb upstream 0.5kb upstream 500 false chr4: 35374568-35375067 Medicago truncatula
Medtr4g088770 0.5kb downstream 0.5kb downstream 2308 true chr4: 35372260-35374567 Medicago truncatula
Medtr4g088770 0.5kb downstream 0.5kb downstream 500 false chr4: 35372260-35372759 Medicago truncatula
Medtr4g088770 1.0kb upstream 1.0kb upstream 2808 true chr4: 35372760-35375567 Medicago truncatula
Medtr4g088770 1.0kb upstream 1.0kb upstream 1000 false chr4: 35374568-35375567 Medicago truncatula
Medtr4g088770 1.0kb downstream 1.0kb downstream 2808 true chr4: 35371760-35374567 Medicago truncatula
Medtr4g088770 1.0kb downstream 1.0kb downstream 1000 false chr4: 35371760-35372759 Medicago truncatula
Medtr4g088770 2.0kb upstream 2.0kb upstream 3808 true chr4: 35372760-35376567 Medicago truncatula
Medtr4g088770 2.0kb upstream 2.0kb upstream 2000 false chr4: 35374568-35376567 Medicago truncatula
Medtr4g088770 2.0kb downstream 2.0kb downstream 3808 true chr4: 35370760-35374567 Medicago truncatula
Medtr4g088770 2.0kb downstream 2.0kb downstream 2000 false chr4: 35370760-35372759 Medicago truncatula
Medtr4g088770 5.0kb upstream 5.0kb upstream 6808 true chr4: 35372760-35379567 Medicago truncatula
Medtr4g088770 5.0kb upstream 5.0kb upstream 5000 false chr4: 35374568-35379567 Medicago truncatula
Medtr4g088770 5.0kb downstream 5.0kb downstream 6808 true chr4: 35367760-35374567 Medicago truncatula
Medtr4g088770 5.0kb downstream 5.0kb downstream 5000 false chr4: 35367760-35372759 Medicago truncatula
Medtr4g088770 10.0kb upstream 10.0kb upstream 11808 true chr4: 35372760-35384567 Medicago truncatula
Medtr4g088770 10.0kb upstream 10.0kb upstream 10000 false chr4: 35374568-35384567 Medicago truncatula
Medtr4g088770 10.0kb downstream 10.0kb downstream 11808 true chr4: 35362760-35374567 Medicago truncatula
Medtr4g088770 10.0kb downstream 10.0kb downstream 10000 false chr4: 35362760-35372759 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298563 5265 Fabidae View MSA
124071276 5270 Rosid View MSA
123751272 5271 Pentapetalae View MSA
122785688 5272 Eudicot View MSA
122045708 5273 Angiosperm View MSA
123429021 5275 Viridiplantae View MSA
121310489 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 476.673     High High
cufflinks 163.026     High  
cufflinks 172.945     High  
cufflinks 120.606     High  
cufflinks 64.777     High Low
cufflinks 187.558     High  
cufflinks 490.126     High High
cufflinks 232.539     High  
cufflinks 210.294     High  

0 Strain