Gene : Medtr4g088615 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR13718 - RIBOSOMAL S SUBUNIT Description:  ribosomal protein S5
Genomic Order:  4432 Name:  ? Medtr4g088615
Secondary Identifier:  ? PAC:31114261
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g088615 0.5kb upstream 0.5kb upstream 2708 true chr4: 35234281-35236988 Medicago truncatula
Medtr4g088615 0.5kb upstream 0.5kb upstream 500 false chr4: 35234281-35234780 Medicago truncatula
Medtr4g088615 0.5kb downstream 0.5kb downstream 2708 true chr4: 35234781-35237488 Medicago truncatula
Medtr4g088615 0.5kb downstream 0.5kb downstream 500 false chr4: 35236989-35237488 Medicago truncatula
Medtr4g088615 1.0kb upstream 1.0kb upstream 3208 true chr4: 35233781-35236988 Medicago truncatula
Medtr4g088615 1.0kb upstream 1.0kb upstream 1000 false chr4: 35233781-35234780 Medicago truncatula
Medtr4g088615 1.0kb downstream 1.0kb downstream 3208 true chr4: 35234781-35237988 Medicago truncatula
Medtr4g088615 1.0kb downstream 1.0kb downstream 1000 false chr4: 35236989-35237988 Medicago truncatula
Medtr4g088615 2.0kb upstream 2.0kb upstream 4208 true chr4: 35232781-35236988 Medicago truncatula
Medtr4g088615 2.0kb upstream 2.0kb upstream 2000 false chr4: 35232781-35234780 Medicago truncatula
Medtr4g088615 2.0kb downstream 2.0kb downstream 4208 true chr4: 35234781-35238988 Medicago truncatula
Medtr4g088615 2.0kb downstream 2.0kb downstream 2000 false chr4: 35236989-35238988 Medicago truncatula
Medtr4g088615 5.0kb upstream 5.0kb upstream 7208 true chr4: 35229781-35236988 Medicago truncatula
Medtr4g088615 5.0kb upstream 5.0kb upstream 5000 false chr4: 35229781-35234780 Medicago truncatula
Medtr4g088615 5.0kb downstream 5.0kb downstream 7208 true chr4: 35234781-35241988 Medicago truncatula
Medtr4g088615 5.0kb downstream 5.0kb downstream 5000 false chr4: 35236989-35241988 Medicago truncatula
Medtr4g088615 10.0kb upstream 10.0kb upstream 12208 true chr4: 35224781-35236988 Medicago truncatula
Medtr4g088615 10.0kb upstream 10.0kb upstream 10000 false chr4: 35224781-35234780 Medicago truncatula
Medtr4g088615 10.0kb downstream 10.0kb downstream 12208 true chr4: 35234781-35246988 Medicago truncatula
Medtr4g088615 10.0kb downstream 10.0kb downstream 10000 false chr4: 35236989-35246988 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300537 5265 Fabidae View MSA
124064887 5270 Rosid View MSA
123746932 5271 Pentapetalae View MSA
122792808 5272 Eudicot View MSA
122046027 5273 Angiosperm View MSA
121345659 5274 Embryophyte View MSA
123426333 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.224        
cufflinks 81.332     High  
cufflinks 84.52     High  
cufflinks 4.561        
cufflinks 107.743     High High
cufflinks 2.113       Low
cufflinks 3.787        
cufflinks 99.867     High High
cufflinks 4.79        

0 Strain