Gene : Medtr4g095440 M. truncatula Mt4.0v1

Description:  hypothetical protein Genomic Order:  5043
Name:  ? Medtr4g095440 Secondary Identifier:  ? PAC:31114434

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g095440 0.5kb upstream 0.5kb upstream 3056 true chr4: 39782341-39785396 Medicago truncatula
Medtr4g095440 0.5kb upstream 0.5kb upstream 500 false chr4: 39784897-39785396 Medicago truncatula
Medtr4g095440 0.5kb downstream 0.5kb downstream 3056 true chr4: 39781841-39784896 Medicago truncatula
Medtr4g095440 0.5kb downstream 0.5kb downstream 500 false chr4: 39781841-39782340 Medicago truncatula
Medtr4g095440 1.0kb upstream 1.0kb upstream 3556 true chr4: 39782341-39785896 Medicago truncatula
Medtr4g095440 1.0kb upstream 1.0kb upstream 1000 false chr4: 39784897-39785896 Medicago truncatula
Medtr4g095440 1.0kb downstream 1.0kb downstream 3556 true chr4: 39781341-39784896 Medicago truncatula
Medtr4g095440 1.0kb downstream 1.0kb downstream 1000 false chr4: 39781341-39782340 Medicago truncatula
Medtr4g095440 2.0kb upstream 2.0kb upstream 4556 true chr4: 39782341-39786896 Medicago truncatula
Medtr4g095440 2.0kb upstream 2.0kb upstream 2000 false chr4: 39784897-39786896 Medicago truncatula
Medtr4g095440 2.0kb downstream 2.0kb downstream 4556 true chr4: 39780341-39784896 Medicago truncatula
Medtr4g095440 2.0kb downstream 2.0kb downstream 2000 false chr4: 39780341-39782340 Medicago truncatula
Medtr4g095440 5.0kb upstream 5.0kb upstream 7556 true chr4: 39782341-39789896 Medicago truncatula
Medtr4g095440 5.0kb upstream 5.0kb upstream 5000 false chr4: 39784897-39789896 Medicago truncatula
Medtr4g095440 5.0kb downstream 5.0kb downstream 7556 true chr4: 39777341-39784896 Medicago truncatula
Medtr4g095440 5.0kb downstream 5.0kb downstream 5000 false chr4: 39777341-39782340 Medicago truncatula
Medtr4g095440 10.0kb upstream 10.0kb upstream 12556 true chr4: 39782341-39794896 Medicago truncatula
Medtr4g095440 10.0kb upstream 10.0kb upstream 10000 false chr4: 39784897-39794896 Medicago truncatula
Medtr4g095440 10.0kb downstream 10.0kb downstream 12556 true chr4: 39772341-39784896 Medicago truncatula
Medtr4g095440 10.0kb downstream 10.0kb downstream 10000 false chr4: 39772341-39782340 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299401 5265 Fabidae View MSA
124070403 5270 Rosid View MSA
123745090 5271 Pentapetalae View MSA
122786349 5272 Eudicot View MSA
122049754 5273 Angiosperm View MSA
121311576 5274 Embryophyte View MSA
123348854 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.105       Low
cufflinks 1.649        
cufflinks 2.335        
cufflinks 0.723        
cufflinks 3.328       High
cufflinks 0.104     Low Low
cufflinks 1.33        
cufflinks 2.653        
cufflinks 0.636        

0 Strain