Gene : Medtr4g096900 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Description:  aspartate carbamoyltransferase, catalytic chain
Genomic Order:  4912 Name:  ? Medtr4g096900
Secondary Identifier:  ? PAC:31107007
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-162 Medicago truncatula pathologic  
Mtruncatula PWY-5686 Medicago truncatula pathologic  
Mtruncatula PWY-7211 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g096900 0.5kb upstream 0.5kb upstream 2645 true chr4: 38584923-38587567 Medicago truncatula
Medtr4g096900 0.5kb upstream 0.5kb upstream 500 false chr4: 38584923-38585422 Medicago truncatula
Medtr4g096900 0.5kb downstream 0.5kb downstream 2645 true chr4: 38585423-38588067 Medicago truncatula
Medtr4g096900 0.5kb downstream 0.5kb downstream 500 false chr4: 38587568-38588067 Medicago truncatula
Medtr4g096900 1.0kb upstream 1.0kb upstream 3145 true chr4: 38584423-38587567 Medicago truncatula
Medtr4g096900 1.0kb upstream 1.0kb upstream 1000 false chr4: 38584423-38585422 Medicago truncatula
Medtr4g096900 1.0kb downstream 1.0kb downstream 3145 true chr4: 38585423-38588567 Medicago truncatula
Medtr4g096900 1.0kb downstream 1.0kb downstream 1000 false chr4: 38587568-38588567 Medicago truncatula
Medtr4g096900 2.0kb upstream 2.0kb upstream 4145 true chr4: 38583423-38587567 Medicago truncatula
Medtr4g096900 2.0kb upstream 2.0kb upstream 2000 false chr4: 38583423-38585422 Medicago truncatula
Medtr4g096900 2.0kb downstream 2.0kb downstream 4145 true chr4: 38585423-38589567 Medicago truncatula
Medtr4g096900 2.0kb downstream 2.0kb downstream 2000 false chr4: 38587568-38589567 Medicago truncatula
Medtr4g096900 5.0kb upstream 5.0kb upstream 7145 true chr4: 38580423-38587567 Medicago truncatula
Medtr4g096900 5.0kb upstream 5.0kb upstream 5000 false chr4: 38580423-38585422 Medicago truncatula
Medtr4g096900 5.0kb downstream 5.0kb downstream 7145 true chr4: 38585423-38592567 Medicago truncatula
Medtr4g096900 5.0kb downstream 5.0kb downstream 5000 false chr4: 38587568-38592567 Medicago truncatula
Medtr4g096900 10.0kb upstream 10.0kb upstream 12145 true chr4: 38575423-38587567 Medicago truncatula
Medtr4g096900 10.0kb upstream 10.0kb upstream 10000 false chr4: 38575423-38585422 Medicago truncatula
Medtr4g096900 10.0kb downstream 10.0kb downstream 12145 true chr4: 38585423-38597567 Medicago truncatula
Medtr4g096900 10.0kb downstream 10.0kb downstream 10000 false chr4: 38587568-38597567 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312207 5265 Fabidae View MSA
124063971 5270 Rosid View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.878        
cufflinks 2.539        
cufflinks 3.712       High
cufflinks 0.744       Low
cufflinks 3.772       High
cufflinks 0.473       Low
cufflinks 1.297        
cufflinks 2.808        
cufflinks 1.621        

0 Strain