Gene : Medtr4g096790 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11759:SF12 - 40S RIBOSOMAL PROTEIN S14-1-RELATED Description:  ribosomal protein S11
Genomic Order:  4903 Name:  ? Medtr4g096790
Secondary Identifier:  ? PAC:31113718
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g096790 0.5kb upstream 0.5kb upstream 3263 true chr4: 38514198-38517460 Medicago truncatula
Medtr4g096790 0.5kb upstream 0.5kb upstream 500 false chr4: 38514198-38514697 Medicago truncatula
Medtr4g096790 0.5kb downstream 0.5kb downstream 3263 true chr4: 38514698-38517960 Medicago truncatula
Medtr4g096790 0.5kb downstream 0.5kb downstream 500 false chr4: 38517461-38517960 Medicago truncatula
Medtr4g096790 1.0kb upstream 1.0kb upstream 3763 true chr4: 38513698-38517460 Medicago truncatula
Medtr4g096790 1.0kb upstream 1.0kb upstream 1000 false chr4: 38513698-38514697 Medicago truncatula
Medtr4g096790 1.0kb downstream 1.0kb downstream 3763 true chr4: 38514698-38518460 Medicago truncatula
Medtr4g096790 1.0kb downstream 1.0kb downstream 1000 false chr4: 38517461-38518460 Medicago truncatula
Medtr4g096790 2.0kb upstream 2.0kb upstream 4763 true chr4: 38512698-38517460 Medicago truncatula
Medtr4g096790 2.0kb upstream 2.0kb upstream 2000 false chr4: 38512698-38514697 Medicago truncatula
Medtr4g096790 2.0kb downstream 2.0kb downstream 4763 true chr4: 38514698-38519460 Medicago truncatula
Medtr4g096790 2.0kb downstream 2.0kb downstream 2000 false chr4: 38517461-38519460 Medicago truncatula
Medtr4g096790 5.0kb upstream 5.0kb upstream 7763 true chr4: 38509698-38517460 Medicago truncatula
Medtr4g096790 5.0kb upstream 5.0kb upstream 5000 false chr4: 38509698-38514697 Medicago truncatula
Medtr4g096790 5.0kb downstream 5.0kb downstream 7763 true chr4: 38514698-38522460 Medicago truncatula
Medtr4g096790 5.0kb downstream 5.0kb downstream 5000 false chr4: 38517461-38522460 Medicago truncatula
Medtr4g096790 10.0kb upstream 10.0kb upstream 12763 true chr4: 38504698-38517460 Medicago truncatula
Medtr4g096790 10.0kb upstream 10.0kb upstream 10000 false chr4: 38504698-38514697 Medicago truncatula
Medtr4g096790 10.0kb downstream 10.0kb downstream 12763 true chr4: 38514698-38527460 Medicago truncatula
Medtr4g096790 10.0kb downstream 10.0kb downstream 10000 false chr4: 38517461-38527460 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314462 5265 Fabidae View MSA
124067342 5270 Rosid View MSA
123748294 5271 Pentapetalae View MSA
122796164 5272 Eudicot View MSA
122046051 5273 Angiosperm View MSA
121350914 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.027     High  
cufflinks 23.987     High Low
cufflinks 29.691     High  
cufflinks 91.051     High High
cufflinks 38.275     High  
cufflinks 75.375     High High
cufflinks 40.321     High  
cufflinks 28.539     High  
cufflinks 59.149     High  

0 Strain