Gene : Medtr4g096820 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12202:SF0 - PROTEIN F58B3.4 Description:  pre-rRNA-processing esf1-like protein
Genomic Order:  4906 Name:  ? Medtr4g096820
Secondary Identifier:  ? PAC:31108829
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g096820 0.5kb upstream 0.5kb upstream 4903 true chr4: 38526216-38531118 Medicago truncatula
Medtr4g096820 0.5kb upstream 0.5kb upstream 500 false chr4: 38530619-38531118 Medicago truncatula
Medtr4g096820 0.5kb downstream 0.5kb downstream 4903 true chr4: 38525716-38530618 Medicago truncatula
Medtr4g096820 0.5kb downstream 0.5kb downstream 500 false chr4: 38525716-38526215 Medicago truncatula
Medtr4g096820 1.0kb upstream 1.0kb upstream 5403 true chr4: 38526216-38531618 Medicago truncatula
Medtr4g096820 1.0kb upstream 1.0kb upstream 1000 false chr4: 38530619-38531618 Medicago truncatula
Medtr4g096820 1.0kb downstream 1.0kb downstream 5403 true chr4: 38525216-38530618 Medicago truncatula
Medtr4g096820 1.0kb downstream 1.0kb downstream 1000 false chr4: 38525216-38526215 Medicago truncatula
Medtr4g096820 2.0kb upstream 2.0kb upstream 6403 true chr4: 38526216-38532618 Medicago truncatula
Medtr4g096820 2.0kb upstream 2.0kb upstream 2000 false chr4: 38530619-38532618 Medicago truncatula
Medtr4g096820 2.0kb downstream 2.0kb downstream 6403 true chr4: 38524216-38530618 Medicago truncatula
Medtr4g096820 2.0kb downstream 2.0kb downstream 2000 false chr4: 38524216-38526215 Medicago truncatula
Medtr4g096820 5.0kb upstream 5.0kb upstream 9403 true chr4: 38526216-38535618 Medicago truncatula
Medtr4g096820 5.0kb upstream 5.0kb upstream 5000 false chr4: 38530619-38535618 Medicago truncatula
Medtr4g096820 5.0kb downstream 5.0kb downstream 9403 true chr4: 38521216-38530618 Medicago truncatula
Medtr4g096820 5.0kb downstream 5.0kb downstream 5000 false chr4: 38521216-38526215 Medicago truncatula
Medtr4g096820 10.0kb upstream 10.0kb upstream 14403 true chr4: 38526216-38540618 Medicago truncatula
Medtr4g096820 10.0kb upstream 10.0kb upstream 10000 false chr4: 38530619-38540618 Medicago truncatula
Medtr4g096820 10.0kb downstream 10.0kb downstream 14403 true chr4: 38516216-38530618 Medicago truncatula
Medtr4g096820 10.0kb downstream 10.0kb downstream 10000 false chr4: 38516216-38526215 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299332 5265 Fabidae View MSA
124067821 5270 Rosid View MSA
123737392 5271 Pentapetalae View MSA
122788396 5272 Eudicot View MSA
122046385 5273 Angiosperm View MSA
121346233 5274 Embryophyte View MSA
123423804 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.974        
cufflinks 6.712        
cufflinks 7.351        
cufflinks 0.938       Low
cufflinks 10.625     High High
cufflinks 0.801       Low
cufflinks 1.52        
cufflinks 6.404        
cufflinks 1.219        

0 Strain