Gene : Medtr4g103610 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF06148//PF12022 - COG (conserved oligomeric Golgi) complex component, COG2 (COG2) // Domain of unknown function (DUF3510) (DUF3510) Description:  oligomeric subunit-like protein
Genomic Order:  5402 Name:  ? Medtr4g103610
Secondary Identifier:  ? PAC:31114241
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g103610 0.5kb upstream 0.5kb upstream 7685 true chr4: 42823987-42831671 Medicago truncatula
Medtr4g103610 0.5kb upstream 0.5kb upstream 500 false chr4: 42823987-42824486 Medicago truncatula
Medtr4g103610 0.5kb downstream 0.5kb downstream 7685 true chr4: 42824487-42832171 Medicago truncatula
Medtr4g103610 0.5kb downstream 0.5kb downstream 500 false chr4: 42831672-42832171 Medicago truncatula
Medtr4g103610 1.0kb upstream 1.0kb upstream 8185 true chr4: 42823487-42831671 Medicago truncatula
Medtr4g103610 1.0kb upstream 1.0kb upstream 1000 false chr4: 42823487-42824486 Medicago truncatula
Medtr4g103610 1.0kb downstream 1.0kb downstream 8185 true chr4: 42824487-42832671 Medicago truncatula
Medtr4g103610 1.0kb downstream 1.0kb downstream 1000 false chr4: 42831672-42832671 Medicago truncatula
Medtr4g103610 2.0kb upstream 2.0kb upstream 9185 true chr4: 42822487-42831671 Medicago truncatula
Medtr4g103610 2.0kb upstream 2.0kb upstream 2000 false chr4: 42822487-42824486 Medicago truncatula
Medtr4g103610 2.0kb downstream 2.0kb downstream 9185 true chr4: 42824487-42833671 Medicago truncatula
Medtr4g103610 2.0kb downstream 2.0kb downstream 2000 false chr4: 42831672-42833671 Medicago truncatula
Medtr4g103610 5.0kb upstream 5.0kb upstream 12185 true chr4: 42819487-42831671 Medicago truncatula
Medtr4g103610 5.0kb upstream 5.0kb upstream 5000 false chr4: 42819487-42824486 Medicago truncatula
Medtr4g103610 5.0kb downstream 5.0kb downstream 12185 true chr4: 42824487-42836671 Medicago truncatula
Medtr4g103610 5.0kb downstream 5.0kb downstream 5000 false chr4: 42831672-42836671 Medicago truncatula
Medtr4g103610 10.0kb upstream 10.0kb upstream 17185 true chr4: 42814487-42831671 Medicago truncatula
Medtr4g103610 10.0kb upstream 10.0kb upstream 10000 false chr4: 42814487-42824486 Medicago truncatula
Medtr4g103610 10.0kb downstream 10.0kb downstream 17185 true chr4: 42824487-42841671 Medicago truncatula
Medtr4g103610 10.0kb downstream 10.0kb downstream 10000 false chr4: 42831672-42841671 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303387 5265 Fabidae View MSA
124060440 5270 Rosid View MSA
123737600 5271 Pentapetalae View MSA
122792763 5272 Eudicot View MSA
122042143 5273 Angiosperm View MSA
121348897 5274 Embryophyte View MSA
123428033 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.75        
cufflinks 1.929        
cufflinks 2.012        
cufflinks 1.107        
cufflinks 2.55       High
cufflinks 0.695       Low
cufflinks 1.267        
cufflinks 1.578        
cufflinks 1.877        

0 Strain