Gene : Medtr4g097540 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11751:SF431 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4-RELATED Description:  1-aminocyclopropane-1-carboxylate synthase
Genomic Order:  5098 Name:  ? Medtr4g097540
Secondary Identifier:  ? PAC:31106303
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ETHYL-PWY Medicago truncatula pathologic  
Mtruncatula PWY-7270 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g097540 0.5kb upstream 0.5kb upstream 2590 true chr4: 40206378-40208967 Medicago truncatula
Medtr4g097540 0.5kb upstream 0.5kb upstream 500 false chr4: 40206378-40206877 Medicago truncatula
Medtr4g097540 0.5kb downstream 0.5kb downstream 2590 true chr4: 40206878-40209467 Medicago truncatula
Medtr4g097540 0.5kb downstream 0.5kb downstream 500 false chr4: 40208968-40209467 Medicago truncatula
Medtr4g097540 1.0kb upstream 1.0kb upstream 3090 true chr4: 40205878-40208967 Medicago truncatula
Medtr4g097540 1.0kb upstream 1.0kb upstream 1000 false chr4: 40205878-40206877 Medicago truncatula
Medtr4g097540 1.0kb downstream 1.0kb downstream 3090 true chr4: 40206878-40209967 Medicago truncatula
Medtr4g097540 1.0kb downstream 1.0kb downstream 1000 false chr4: 40208968-40209967 Medicago truncatula
Medtr4g097540 2.0kb upstream 2.0kb upstream 4090 true chr4: 40204878-40208967 Medicago truncatula
Medtr4g097540 2.0kb upstream 2.0kb upstream 2000 false chr4: 40204878-40206877 Medicago truncatula
Medtr4g097540 2.0kb downstream 2.0kb downstream 4090 true chr4: 40206878-40210967 Medicago truncatula
Medtr4g097540 2.0kb downstream 2.0kb downstream 2000 false chr4: 40208968-40210967 Medicago truncatula
Medtr4g097540 5.0kb upstream 5.0kb upstream 7090 true chr4: 40201878-40208967 Medicago truncatula
Medtr4g097540 5.0kb upstream 5.0kb upstream 5000 false chr4: 40201878-40206877 Medicago truncatula
Medtr4g097540 5.0kb downstream 5.0kb downstream 7090 true chr4: 40206878-40213967 Medicago truncatula
Medtr4g097540 5.0kb downstream 5.0kb downstream 5000 false chr4: 40208968-40213967 Medicago truncatula
Medtr4g097540 10.0kb upstream 10.0kb upstream 12090 true chr4: 40196878-40208967 Medicago truncatula
Medtr4g097540 10.0kb upstream 10.0kb upstream 10000 false chr4: 40196878-40206877 Medicago truncatula
Medtr4g097540 10.0kb downstream 10.0kb downstream 12090 true chr4: 40206878-40218967 Medicago truncatula
Medtr4g097540 10.0kb downstream 10.0kb downstream 10000 false chr4: 40208968-40218967 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313200 5265 Fabidae View MSA
124066319 5270 Rosid View MSA
123745403 5271 Pentapetalae View MSA
122791160 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.671       High
cufflinks 0.027     Low Low
cufflinks 0.205        
cufflinks 0.156        
cufflinks 0.1        
cufflinks 0.117     Low  
cufflinks 1.431        
cufflinks 0.036     Low Low
cufflinks 4.765       High

0 Strain